Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja6g2598 | ATGGGGGAAAGAATGCTAATACTCCTATCACTCATTTTCAGTTATTTGTTGACTGTGGACGCAAGAACAGCACAAAGTGATTACACTGCTCTGCTGGCTCTGAAGTTAGGGTGGGAGAACACGCCACCAGATTGGGTGGGCTCTGATCCTTGTGGTGATGATTGGGAGGGCATTGAGTGCTCCAAGTCACGCATTACCAGCATATCATTAGCAAGCATGGATTTGTCTGGCCAGCTTTCTTCAGACATTAGATTACTGTCTGAATTGCGGGTTTTGGATCTGTCCTACAATAATAAGTTAACAGGATCACTTCCCAGAGAAATTGCAAATTTGAAGAAGTTAACACACTTACTTCTTATTAGCTGTGGTTTCACTGGTCCTCTCCCTGATACGATAGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATAGCTTCAGTGGGCGAATCCCACCTGCTATTGGTAATCTCTCAAATGTTAATTGGCTAGACTTAGCTGAAAACCAGCTTGATGGGCCCATCCCAATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACCATACAAAGCACTTTCATTTTGGGAAGAATAAACTTTCAGGCAATATTCCTTCTCAACTTTTTAGCTCTGAAATGACTCTGATACATGCACTTTTTGAAGGCAACCAACTTACTGGCAGGATTCCATCTACACTGGGACTTGTCCAGTCTCTGGAGGTGGTGCGCTTTGATGATAATTTTCTAAGTGGACCTTTGCCATTGAACCTCAACAATCTTACAAATGTCCAGAGTTTGTTATTGTCCAACAACCGCCTATCCGGTCCCCTGCCAAACCTTACTGGAATGAAAGCGCTCAACTACCTGGATATGAGCAATAATAGTTTTGATCCATCTGACTTTCCACCGTGGTTATCAACTCTAGAGTCTCTTACAACATTAATGATGGAGAATACACAACTTCAAGGACAAATTCCTGCATCTTTGTTCAGCCTGGCACAGTTACAGACAGTGGTGCTGAAGAACAATCAGCTGAATGGCACTTTAGATATTGGCGCAACCATCAGCAACAAACTGGAACTCCTTGATTTGCAGACTAATTTTGTTGAAGAATTTGATCTTGATCCACAAATTGATGTCTCCAAAGTGGAGATAATACTTGTGAATAACCCAGTTTGTCAAGAGACAGGAGTTGCAAGGACTTATTGCTCCATTTCAAAATCCAATGACTCATACACAACGCCACCAAATAATTGCGTGCATGTTGCCTGCAGCTCAGATCAGATATTAAGCCCCAACTGCAAATGTGCATATCCATATACAGGAACTTTAACTTTCAGAGCCACTTCCTTCTCAGAGACAGGAAATGAGACTATTTTTGCAAACCTGGAGTTTTCTCTGATGCAATCTTTTCAACTATATGATAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAGGGGTTCAGTTCAGTATCTTGATTTGACTTTAAAAGTGTTTCCATCAGGCCAAGATCATTTCAATCGAACTGGGATTTCTAGTATAGCCTTTATGCTTAGCAACCAGACATATAAGCCTCCTAAAATGTTCGGGCCTTATTATTTTATTGGTGATACTTATGAACACTTTGTGGATGATTCAGTATTAGAAGGTCCTGTTCCTTCCAGTAAATCTTCAAATGTTGGCATCATAGCTGGAGCTGCTGGTGGTGGTTCTGCCCTTCTGGTGTTGTTACTCCTTGCATGTGTTTATGTTTTCCGCCAAAAGAAAAATGCGAAAAAAGTTAGTGGGAAAAACAATCCTTTTGGAGAGCAATGGGATCCAGATGAGAGCAACACTAGCATCCCACAGTTAAAAGGAGCAAGGCGCTTCACTTTCGAAGAGATGAAGAACTACACCAGAGACTTTTCGCAAGCCAATAATATAGGGTCAGGGGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGCCAATTAATAGCGGTAAAACGAGCTCAAAAGGAATCTATCCAGGGAGGGATGGAGTTTAAAACTGAGATTGAACTTTTATCCAGGGTCCACCACAAAAATCTTGTTAGCCTTATGGGTTTCTGCTTTGCGGAAGGAGAACAAATGTTGGTTTATGAGTATGTTGCAAATGGTACTCTGAAGGATGCTGTTTCAGGGAAGTCAGGAATTAGATTGGACTGGATTAGAAGATTAAAAATAGCCCTTGATGCTGCAAGGGGGCTGGATTATCTCCATGAACATGCCAACCCTCCTATCATACACAGGGACATCAAATCCACTAACATTTTACTTGACGAGCGCTTGACTGCTAAAGTAGCTGATTTTGGTCTCTCCAAACCTTATGGTGAAAAAGGATATATCACCACTCAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAGCCAATAGAAAGAGGGAAGTATATTGTGAAAGTGGTTAAGAATGCTATTGACAAGACAAAAGACTTCTGTGGTCTTAAGGAAATGCTTGATCCAACCATTGACTTGGCGACACCGCTGCACGGTTTTGAGAAGTTTGTGGATCTTGCAATACAAAGTGTTGAAGATTCAAGTTCTAACAGACCTTCAATGAATTATGTGGTTAAAGAGATTGAAAACATGTTGCATTTGGCTGGTGCAAACCCCAATGCTGAATCAGCATCCACTTCATCCAGCTATGAAGTAAGTAAGGGGAGCTCCCTTCATCCTTATGAGTACTTTGATACAAGTGTGGTACTTCCACGTGCATAA | 2856 | 0.4139 | MGERMLILLSLIFSYLLTVDARTAQSDYTALLALKLGWENTPPDWVGSDPCGDDWEGIECSKSRITSISLASMDLSGQLSSDIRLLSELRVLDLSYNNKLTGSLPREIANLKKLTHLLLISCGFTGPLPDTIGNLERLVFLSLNSNSFSGRIPPAIGNLSNVNWLDLAENQLDGPIPISNGTTPGLDMMHHTKHFHFGKNKLSGNIPSQLFSSEMTLIHALFEGNQLTGRIPSTLGLVQSLEVVRFDDNFLSGPLPLNLNNLTNVQSLLLSNNRLSGPLPNLTGMKALNYLDMSNNSFDPSDFPPWLSTLESLTTLMMENTQLQGQIPASLFSLAQLQTVVLKNNQLNGTLDIGATISNKLELLDLQTNFVEEFDLDPQIDVSKVEIILVNNPVCQETGVARTYCSISKSNDSYTTPPNNCVHVACSSDQILSPNCKCAYPYTGTLTFRATSFSETGNETIFANLEFSLMQSFQLYDKPVDSVSLSNPRRGSVQYLDLTLKVFPSGQDHFNRTGISSIAFMLSNQTYKPPKMFGPYYFIGDTYEHFVDDSVLEGPVPSSKSSNVGIIAGAAGGGSALLVLLLLACVYVFRQKKNAKKVSGKNNPFGEQWDPDESNTSIPQLKGARRFTFEEMKNYTRDFSQANNIGSGGYGKVYRGTLPNGQLIAVKRAQKESIQGGMEFKTEIELLSRVHHKNLVSLMGFCFAEGEQMLVYEYVANGTLKDAVSGKSGIRLDWIRRLKIALDAARGLDYLHEHANPPIIHRDIKSTNILLDERLTAKVADFGLSKPYGEKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARKPIERGKYIVKVVKNAIDKTKDFCGLKEMLDPTIDLATPLHGFEKFVDLAIQSVEDSSSNRPSMNYVVKEIENMLHLAGANPNAESASTSSSYEVSKGSSLHPYEYFDTSVVLPRA* | 952 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja6g2598 | 951 | ProSitePatterns | Protein kinases ATP-binding region signature. | 645 | 667 | IPR017441 | GO:0005524 | |
Lja6g2598 | 951 | Pfam | Protein tyrosine and serine/threonine kinase | 642 | 905 | IPR001245 | GO:0004672|GO:0006468 | |
Lja6g2598 | 951 | Gene3D | Ribonuclease Inhibitor | 181 | 281 | IPR032675 | - | |
Lja6g2598 | 951 | Gene3D | Ribonuclease Inhibitor | 24 | 180 | IPR032675 | - | |
Lja6g2598 | 951 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 7 | 942 | - | - | |
Lja6g2598 | 951 | ProSiteProfiles | Protein kinase domain profile. | 639 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja6g2598 | 951 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 759 | 771 | IPR008271 | GO:0004672|GO:0006468 | |
Lja6g2598 | 951 | CDD | STKc_IRAK | 645 | 909 | - | - | |
Lja6g2598 | 951 | MobiDBLite | consensus disorder prediction | 597 | 617 | - | - | |
Lja6g2598 | 951 | SMART | serkin_6 | 639 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja6g2598 | 951 | Gene3D | Ribonuclease Inhibitor | 282 | 431 | IPR032675 | - | |
Lja6g2598 | 951 | Gene3D | Transferase(Phosphotransferase) domain 1 | 715 | 930 | - | - | |
Lja6g2598 | 951 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED | 7 | 942 | - | - | |
Lja6g2598 | 951 | SUPERFAMILY | Protein kinase-like (PK-like) | 613 | 911 | IPR011009 | - | |
Lja6g2598 | 951 | Pfam | Leucine rich repeat N-terminal domain | 25 | 61 | IPR013210 | - | |
Lja6g2598 | 951 | Gene3D | Phosphorylase Kinase; domain 1 | 610 | 714 | - | - | |
Lja6g2598 | 951 | SUPERFAMILY | L domain-like | 52 | 406 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja6g2598 | Lja-Chr6 | 54768374 | 54774455 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja6g2598 | 7 | 951 | Receptor kinase-like Gene Family | AT5G49760 | 56.513 | 0.0 | 993 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Lja6g2598 | PK_Tyr_Ser-Thr | 2.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja6g2598 | - | - | gmx:100782366 | 1413.67 |