Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2598 ATGGGGGAAAGAATGCTAATACTCCTATCACTCATTTTCAGTTATTTGTTGACTGTGGACGCAAGAACAGCACAAAGTGATTACACTGCTCTGCTGGCTCTGAAGTTAGGGTGGGAGAACACGCCACCAGATTGGGTGGGCTCTGATCCTTGTGGTGATGATTGGGAGGGCATTGAGTGCTCCAAGTCACGCATTACCAGCATATCATTAGCAAGCATGGATTTGTCTGGCCAGCTTTCTTCAGACATTAGATTACTGTCTGAATTGCGGGTTTTGGATCTGTCCTACAATAATAAGTTAACAGGATCACTTCCCAGAGAAATTGCAAATTTGAAGAAGTTAACACACTTACTTCTTATTAGCTGTGGTTTCACTGGTCCTCTCCCTGATACGATAGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATAGCTTCAGTGGGCGAATCCCACCTGCTATTGGTAATCTCTCAAATGTTAATTGGCTAGACTTAGCTGAAAACCAGCTTGATGGGCCCATCCCAATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACCATACAAAGCACTTTCATTTTGGGAAGAATAAACTTTCAGGCAATATTCCTTCTCAACTTTTTAGCTCTGAAATGACTCTGATACATGCACTTTTTGAAGGCAACCAACTTACTGGCAGGATTCCATCTACACTGGGACTTGTCCAGTCTCTGGAGGTGGTGCGCTTTGATGATAATTTTCTAAGTGGACCTTTGCCATTGAACCTCAACAATCTTACAAATGTCCAGAGTTTGTTATTGTCCAACAACCGCCTATCCGGTCCCCTGCCAAACCTTACTGGAATGAAAGCGCTCAACTACCTGGATATGAGCAATAATAGTTTTGATCCATCTGACTTTCCACCGTGGTTATCAACTCTAGAGTCTCTTACAACATTAATGATGGAGAATACACAACTTCAAGGACAAATTCCTGCATCTTTGTTCAGCCTGGCACAGTTACAGACAGTGGTGCTGAAGAACAATCAGCTGAATGGCACTTTAGATATTGGCGCAACCATCAGCAACAAACTGGAACTCCTTGATTTGCAGACTAATTTTGTTGAAGAATTTGATCTTGATCCACAAATTGATGTCTCCAAAGTGGAGATAATACTTGTGAATAACCCAGTTTGTCAAGAGACAGGAGTTGCAAGGACTTATTGCTCCATTTCAAAATCCAATGACTCATACACAACGCCACCAAATAATTGCGTGCATGTTGCCTGCAGCTCAGATCAGATATTAAGCCCCAACTGCAAATGTGCATATCCATATACAGGAACTTTAACTTTCAGAGCCACTTCCTTCTCAGAGACAGGAAATGAGACTATTTTTGCAAACCTGGAGTTTTCTCTGATGCAATCTTTTCAACTATATGATAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAGGGGTTCAGTTCAGTATCTTGATTTGACTTTAAAAGTGTTTCCATCAGGCCAAGATCATTTCAATCGAACTGGGATTTCTAGTATAGCCTTTATGCTTAGCAACCAGACATATAAGCCTCCTAAAATGTTCGGGCCTTATTATTTTATTGGTGATACTTATGAACACTTTGTGGATGATTCAGTATTAGAAGGTCCTGTTCCTTCCAGTAAATCTTCAAATGTTGGCATCATAGCTGGAGCTGCTGGTGGTGGTTCTGCCCTTCTGGTGTTGTTACTCCTTGCATGTGTTTATGTTTTCCGCCAAAAGAAAAATGCGAAAAAAGTTAGTGGGAAAAACAATCCTTTTGGAGAGCAATGGGATCCAGATGAGAGCAACACTAGCATCCCACAGTTAAAAGGAGCAAGGCGCTTCACTTTCGAAGAGATGAAGAACTACACCAGAGACTTTTCGCAAGCCAATAATATAGGGTCAGGGGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGCCAATTAATAGCGGTAAAACGAGCTCAAAAGGAATCTATCCAGGGAGGGATGGAGTTTAAAACTGAGATTGAACTTTTATCCAGGGTCCACCACAAAAATCTTGTTAGCCTTATGGGTTTCTGCTTTGCGGAAGGAGAACAAATGTTGGTTTATGAGTATGTTGCAAATGGTACTCTGAAGGATGCTGTTTCAGGGAAGTCAGGAATTAGATTGGACTGGATTAGAAGATTAAAAATAGCCCTTGATGCTGCAAGGGGGCTGGATTATCTCCATGAACATGCCAACCCTCCTATCATACACAGGGACATCAAATCCACTAACATTTTACTTGACGAGCGCTTGACTGCTAAAGTAGCTGATTTTGGTCTCTCCAAACCTTATGGTGAAAAAGGATATATCACCACTCAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAGCCAATAGAAAGAGGGAAGTATATTGTGAAAGTGGTTAAGAATGCTATTGACAAGACAAAAGACTTCTGTGGTCTTAAGGAAATGCTTGATCCAACCATTGACTTGGCGACACCGCTGCACGGTTTTGAGAAGTTTGTGGATCTTGCAATACAAAGTGTTGAAGATTCAAGTTCTAACAGACCTTCAATGAATTATGTGGTTAAAGAGATTGAAAACATGTTGCATTTGGCTGGTGCAAACCCCAATGCTGAATCAGCATCCACTTCATCCAGCTATGAAGTAAGTAAGGGGAGCTCCCTTCATCCTTATGAGTACTTTGATACAAGTGTGGTACTTCCACGTGCATAA 2856 0.4139 MGERMLILLSLIFSYLLTVDARTAQSDYTALLALKLGWENTPPDWVGSDPCGDDWEGIECSKSRITSISLASMDLSGQLSSDIRLLSELRVLDLSYNNKLTGSLPREIANLKKLTHLLLISCGFTGPLPDTIGNLERLVFLSLNSNSFSGRIPPAIGNLSNVNWLDLAENQLDGPIPISNGTTPGLDMMHHTKHFHFGKNKLSGNIPSQLFSSEMTLIHALFEGNQLTGRIPSTLGLVQSLEVVRFDDNFLSGPLPLNLNNLTNVQSLLLSNNRLSGPLPNLTGMKALNYLDMSNNSFDPSDFPPWLSTLESLTTLMMENTQLQGQIPASLFSLAQLQTVVLKNNQLNGTLDIGATISNKLELLDLQTNFVEEFDLDPQIDVSKVEIILVNNPVCQETGVARTYCSISKSNDSYTTPPNNCVHVACSSDQILSPNCKCAYPYTGTLTFRATSFSETGNETIFANLEFSLMQSFQLYDKPVDSVSLSNPRRGSVQYLDLTLKVFPSGQDHFNRTGISSIAFMLSNQTYKPPKMFGPYYFIGDTYEHFVDDSVLEGPVPSSKSSNVGIIAGAAGGGSALLVLLLLACVYVFRQKKNAKKVSGKNNPFGEQWDPDESNTSIPQLKGARRFTFEEMKNYTRDFSQANNIGSGGYGKVYRGTLPNGQLIAVKRAQKESIQGGMEFKTEIELLSRVHHKNLVSLMGFCFAEGEQMLVYEYVANGTLKDAVSGKSGIRLDWIRRLKIALDAARGLDYLHEHANPPIIHRDIKSTNILLDERLTAKVADFGLSKPYGEKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARKPIERGKYIVKVVKNAIDKTKDFCGLKEMLDPTIDLATPLHGFEKFVDLAIQSVEDSSSNRPSMNYVVKEIENMLHLAGANPNAESASTSSSYEVSKGSSLHPYEYFDTSVVLPRA* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2598 951 ProSitePatterns Protein kinases ATP-binding region signature. 645 667 IPR017441 GO:0005524
Lja6g2598 951 Pfam Protein tyrosine and serine/threonine kinase 642 905 IPR001245 GO:0004672|GO:0006468
Lja6g2598 951 Gene3D Ribonuclease Inhibitor 181 281 IPR032675 -
Lja6g2598 951 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Lja6g2598 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 942 - -
Lja6g2598 951 ProSiteProfiles Protein kinase domain profile. 639 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2598 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672|GO:0006468
Lja6g2598 951 CDD STKc_IRAK 645 909 - -
Lja6g2598 951 MobiDBLite consensus disorder prediction 597 617 - -
Lja6g2598 951 SMART serkin_6 639 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2598 951 Gene3D Ribonuclease Inhibitor 282 431 IPR032675 -
Lja6g2598 951 Gene3D Transferase(Phosphotransferase) domain 1 715 930 - -
Lja6g2598 951 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 942 - -
Lja6g2598 951 SUPERFAMILY Protein kinase-like (PK-like) 613 911 IPR011009 -
Lja6g2598 951 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Lja6g2598 951 Gene3D Phosphorylase Kinase; domain 1 610 714 - -
Lja6g2598 951 SUPERFAMILY L domain-like 52 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2598 Lja-Chr6 54768374 54774455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2598 7 951 Receptor kinase-like Gene Family AT5G49760 56.513 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lja6g2598 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2598 - - gmx:100782366 1413.67