Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2596 ATGATAAATCTCACCATTCAATTCGTTGCAGCTACTGTAACTGGTGATGAAGGGGTTGCTGACAACAATCTGAAGCTTTATTCGTACTGGAATAGCTCAAGTTCCTTCAGAGTCCGAATTGCTCTCAACTTAAAAGGAATAACATACGAGTACAAAGCAGTTGATTTGTCGAAAGGCGAACAATATGACCCTGGCTGCCAACATTGTTTATTCATCCATACAGCCTTTTCAAAATCTATGTTTAATGGTAAAAGTACATTAAGGAAAAAGTTAGCCCTGAAGAAGCACAATCTTGGGCCAAAAGTGCAATTGAAAAAGTTGAAAGACCATGCAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCTGATTCTATTCTGTACAGTTACTGA 393 0.3868 MINLTIQFVAATVTGDEGVADNNLKLYSYWNSSSSFRVRIALNLKGITYEYKAVDLSKGEQYDPGCQHCLFIHTAFSKSMFNGKSTLRKKLALKKHNLGPKVQLKKLKDHAGRYATGDEVFLADSILYSY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2596 130 SUPERFAMILY Thioredoxin-like 22 65 IPR036249 -
Lja6g2596 130 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 22 130 IPR004045 -
Lja6g2596 130 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 20 65 - -
Lja6g2596 130 Gene3D Glutaredoxin 26 69 - -
Lja6g2596 130 Pfam Glutathione S-transferase, N-terminal domain 24 64 IPR004045 -
Lja6g2596 130 PANTHER MALEYLACETOACETATE ISOMERASE 20 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2596 Lja-Chr6 54731720 54733256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2596 24 63 Glutathione S-transferase Gene Family AT2G02380 67.500 1.67e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2596 K01800 - gmx:547590 75.8701