Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2551 ATGTCAATATTGTCAGGGAAAATGGGGCAAGACTGTTTGCACTATGATTCCCATGAAGAAACATCCAGTTGCACTTGTTTTCTCATTGGGTTCAGGAGAAAAAACCAAGTGTTAAATTACAGCCATAGCAGCAGCACCAGTGAGATAGGCAACAAGGATTCAGAGGAGCTGTTTGAGATCAATCTGGAGGAGCCATTGGATACAATATCAGAAGACTGTGAGAGCAGTGTGTTCTCTTTTGATATTCACAATGAGAAAGACATTGTTTATGTGGCAGTAGGCCAAGCTGGAGAATCAAGCATGGAAGCGCTTTTGTGGACTTTGAAACATGCTGTCACACCCTCTACCACTGTCTGTTTCATACACGTTTTTCCTGAAATCAGGCTCATTCCAACTCCATTTGGAAAAATTCCAAGGAATCTTGTAGATCCAGAGTATGTTAATTTTCACTTAACTCAAGAGAAAGGCAAGAAGAAAGAGCTCCTTCAAAGGTTCATTGACTTGTGCACTGATTCAAAGGTTAAGGTGGAGATCATGCTCACTGAAGGTGACAACATTTCCAAAGCCATCGTGGACCTTGTTAGGAATCTTGGTATAAGGAAATTGGTGATTGGAACTAGCAAATCTAATTTAAGTAAGTATGTCTCTAGAAGGAGAAATGTCATAGCAGATAAGGTCCTAAAGAATGCCCCAGAAATATGTGATGTTAAAATTATATGCGATGGAAAGGAAGTGATTGATCAAATGATTGTTAGCTCTTCATATTTATGCCCAAGTTCTGGTAGAAGTTCCAGAGTTTCACTAGAAGAAGCTAAATCCCATGGCTTTGTTCAATCGTTGCGTTTTATGCCAAATACTGCATGGTTATCTAGATTCTAG 879 0.3959 MSILSGKMGQDCLHYDSHEETSSCTCFLIGFRRKNQVLNYSHSSSTSEIGNKDSEELFEINLEEPLDTISEDCESSVFSFDIHNEKDIVYVAVGQAGESSMEALLWTLKHAVTPSTTVCFIHVFPEIRLIPTPFGKIPRNLVDPEYVNFHLTQEKGKKKELLQRFIDLCTDSKVKVEIMLTEGDNISKAIVDLVRNLGIRKLVIGTSKSNLSKYVSRRRNVIADKVLKNAPEICDVKIICDGKEVIDQMIVSSSYLCPSSGRSSRVSLEEAKSHGFVQSLRFMPNTAWLSRF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2551 292 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 98 231 - -
Lja6g2551 292 CDD STK_N 88 242 - -
Lja6g2551 292 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 15 290 - -
Lja6g2551 292 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 15 290 - -
Lja6g2551 292 Gene3D HUPs 81 243 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2551 Lja-Chr6 54317932 54321135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2551 89 242 U-box Gene Family AT2G45910 30.380 4.06e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2551 - - gmx:100818837 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4355 4 77095000 77097469 Lja6g2551 6 54317932 54321135 PCT