Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2421 ATGTCCAAATATTCCGGGGATGGCACAGAGGCGAATAGTGTCGCATTTGCATGTAGCACTTCCTCCTCCATCATTCACCATAGCTACAATTCCGTCCCCATACACTATTCATATCGGATTGCCACGTATACAACCCAAGTCACAGGCAGTGTACGTTATCACCACTCACTCTCACAGATGAATTTTTTTTATTTCACGCTTGCAGTACTCTTCGTCACTCCCACTGCCACTGACTGCAGAGAATTTGCATTAACACTGAATATGGCTGAGCCTAATGCTGAGTTGTTGGACTGGTCAAAGAAAGATAAGCGCCGTTTCCTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTACACTGAATGTTTCGGAATGCAACTTTTGAGGAAAAGAGATATTCCTGAAGAGAAATACGCCAATGCTTTTCTTGGATTTGGCTCTGAACAATCCCATTTTGTTGTGGAATTAACTTACAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAAATTTGTTGAAGACGTCCGGGCTAAGGGTGGGAATGTTACGAGGGAGCCTGGTCCAGTTAAGGGTGGGTCAACTGTTATTGCATTTGTGAAGGATCCTGATGGTTACCTTTTTGAGATCATTCAAAGGGCTTCAACCCCTGAGCCGTTGTGCCAAGTTATGCTTCGCGTTGGTGATTTAGAGCGCTCGATTAAGTTTTATGAAAAGGCTCTAGGTTTAAAAGTGGTAAAGAAGACTGATAGACCTGAGCAAAAGTACACTATAGCTATGCTTGGGTATGCAGAAGAGCATGAGACAATTGTGTTGGAGCTGACATATAACTATGGTGTCACTGAATACACCAAAGGAAATGCTTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGTGCTGAGCTAGTCAACTTAGCCACCCAAGAGTTTGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCCGGCCTTAACACAAAAATCGCTTCTTTCTTAGATCCAGATGGATGGAAAACTGTTTTAGTGGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 1116 0.4328 MSKYSGDGTEANSVAFACSTSSSIIHHSYNSVPIHYSYRIATYTTQVTGSVRYHHSLSQMNFFYFTLAVLFVTPTATDCREFALTLNMAEPNAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGSEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGSTVIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2421 371 Gene3D - 80 231 IPR029068 -
Lja6g2421 371 TIGRFAM glyox_I: lactoylglutathione lyase 236 366 IPR004361 GO:0004462|GO:0046872
Lja6g2421 371 TIGRFAM glyox_I: lactoylglutathione lyase 92 238 IPR004361 GO:0004462|GO:0046872
Lja6g2421 371 Gene3D - 232 371 IPR029068 -
Lja6g2421 371 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 235 363 IPR037523 -
Lja6g2421 371 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 104 232 IPR029068 -
Lja6g2421 371 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 107 226 IPR004360 -
Lja6g2421 371 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 238 357 IPR004360 -
Lja6g2421 371 CDD GlxI_Ni 107 227 - -
Lja6g2421 371 PANTHER LACTOYLGLUTATHIONE LYASE 94 371 - -
Lja6g2421 371 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 94 371 - -
Lja6g2421 371 ProSitePatterns Glyoxalase I signature 2. 172 184 IPR018146 GO:0004462|GO:0046872
Lja6g2421 371 ProSitePatterns Glyoxalase I signature 1. 238 259 IPR018146 GO:0004462|GO:0046872
Lja6g2421 371 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 105 229 IPR037523 -
Lja6g2421 371 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 236 362 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2421 Lja-Chr6 53036179 53039655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2421 238 362 Calmodulin-binding Proteins AT1G08110 27.333 1.39e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2421 K01759 - gmx:100799447 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2421 6 53036179 53039655 Lja6g2421 6 53036179 53039655 ECH
Lja6g2421 6 53036179 53039655 Lja4g4266 4 76161795 76165096 ECH
Lja4g4266 4 76161795 76165096 Lja6g2421 6 53036179 53039655 PCT