Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2357 ATGCATCCTGATCAGAGGAAAAAGTCTGTGGATGTAGATTTCTTTACTGAATATGGTGAAGGGAGTAGATACAAAATAGAGGAAGTCATTGGTAAAGGAAGCTATGGAGTTGTTTGCTCTGCATACGATACACACACCGGGGAAAAGGTTGCTATAAAGAAAATCAATGACATATTTGAACACGTTTCTGACGCCACTCGCATTCTTCGCGAGATTAAGCTTCTTAGACTTTTACGTCATCCGGATATTGTGGAGATCAAGCATATTCTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATCTATGTTGTTTTCGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACACCAGAACATTACCAGTTTTTCCTCTATCAGCTTCTTCGAGGCTTGAAATATATACATACAGCAAATGTTTTTCACCGAGATTTAAAGCCCAAAAACATATTAGCAAATGCTGACTGCAAATTGAAGATTTGTGATTTTGGTCTTGCCAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGCGGATCCTTTTTCTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCCGAACTTTTAACTGGAAAACCTCTTTTCCCTGGAAAGAATGTTGTCCATCAACTGGACCTCATGACTGATTTTCTTGGAACACCATCTCCTGAAGCCATAGCCAGGGTACGGAATGAGAAGGCTCGGAGATACTTGAGCAGTATGCGTAAGAAGAGGCCAATTCCTTTCACACATAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTTTGCTAGAAAGAATGCTGGCATTTGAGCCTAAAGATCGGCCTACTGCTGAAGAGGCCCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAAAGAGAACCTTCTGCTCAGCCAGTTACCAAGATGGAGTTTGAATTTGAGAGGCGCAGGATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGACTCTGGAATACCATCCCAAGATGTTAAAGGAATTTCTTGAGGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAAGGGGGAACAGTTGCTCCTCCTGAGAGGCAGCATGCATCATTACCCAGAGCATGCGTGTCATATTCTGATAACACAATACAGAATACGGCTGAGGTTGCAGATGATCTATCCAAATGTTGCATCAAAGAAGTTCAGAAACCACCCATAGATAGGAGTAGTGCTATTCCGATGACTCGGGTTCCCGTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCAAGGCCCGGAAAAGTTGTAGGTTCAGTAATGCGTTACAATAACTGTGGGGTGGCAGTGACAGCAGAGACCGATCAGCGGAGGGTGGTTAGGAATCCATCTGTTTCAGCTCAGTATGCCGCTTCAAGCGGTTCATATCCTAGGAGAAATCCAAGCTATAAAAATGAGAGGCCAGATGATGATGGGATTGAAGGTTCCAATGGACTGCAGCCAAAGCCTCAATACATGGCTAGAAAAGTTGCTGCTGGTCAAGGCGGAGCTGGTGGTCAGTGGTATTGA 1686 0.4342 MHPDQRKKSVDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKRPIPFTHKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRACVSYSDNTIQNTAEVADDLSKCCIKEVQKPPIDRSSAIPMTRVPVQAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAETDQRRVVRNPSVSAQYAASSGSYPRRNPSYKNERPDDDGIEGSNGLQPKPQYMARKVAAGQGGAGGQWY* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2357 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 477 - -
Lja6g2357 561 ProSiteProfiles Protein kinase domain profile. 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2357 561 Gene3D Transferase(Phosphotransferase) domain 1 110 338 - -
Lja6g2357 561 SMART serkin_6 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2357 561 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Lja6g2357 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 477 - -
Lja6g2357 561 CDD STKc_TDY_MAPK 23 360 - -
Lja6g2357 561 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Lja6g2357 561 MobiDBLite consensus disorder prediction 506 542 - -
Lja6g2357 561 ProSitePatterns Protein kinases ATP-binding region signature. 30 54 IPR017441 GO:0005524
Lja6g2357 561 Pfam Protein kinase domain 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2357 561 ProSitePatterns MAP kinase signature. 59 162 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2357 Lja-Chr6 52456862 52462815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2357 1 561 MAP Kinase Gene Family AT5G19010 80.139 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja6g2357 Pkinase 6.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2357 - K04371 gmx:100781957 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2357 6 52456862 52462815 Lja6g2357 6 52456862 52462815 ECH
Lja4g1199 4 10639157 10644223 Lja6g2357 6 52456862 52462815 PCT