Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2341 ATGGAACGTGCATTTGTCCCTCATTTACTTTGGAGCCTCATAATGCTGATGCTAGCTAGCCTTACGATTCTCCTAATGAAATTCCTAAAACACAACCACATCAAAAAACCAAGACTACCTCCAGGTCCCAAACCTTGGCCAATAATTGGCAATATTCCTGAACTGCTTGCAAATAAGTCTGGATTTAGATACATACAAAAAGTAATGAGTGATCTCAACACTGAAATTGCATGCATCCGTTTAGGCAATGTTCATGTGATCCCGGTGTCAAGTCCTGAAATTGCACGTGAACTCCTAATAAAACAGGATGCTGTTTTTGCCTCAAGGCCCATGAATTGGTCCAGTGAACATGTTTCACTTGGATATCTAACCACAGCTCTCTCTCCTTACGGAGAACAGTGGAAGAAAATGAAGAAAGTGGTCATCAACGAAATGCTTTCACCCCTCAAGCATGATTGGCTTCATGACAAGAGGGTCGAAGAAGCCGATAACCTTGTCCGCTATGTCTACAATCAGTGTAGAAATGGTGATGGTGGGGTGGTAAATGTTAGGGTTGCTGCACAACATTATTCTGGGAATGTGATAAGGAGGTTGATTTTCAATAGAAGGTACTTTGGAGAGGGTAGGGAAGATGGAGGACCCGGTGTTGAAGAAATGGAGCATATAGAAGCACTTTTCAATGTGTTGAAGTACCTTTTTGCCTTCTCTGTTTCTGATTACTTGCCATGCTTCAGGGGACTTGACTTGGATGGTCATAAAAAGAACCTGAAGAAGGCTTGTGAGGATGTGAGGAAATATCATGATCCAATTATTGAAGACAGAATTGAGCAATGGAAGAATGAGAAGAAGACAAATGAAGAAGACTTGCTTGATGTTCTCATCTCACTCAAAGATGCTGACAACAATCAACTTTTGACAATGGAGGAAATAAAATCTCAAATTCTGGAAATGTGTATTGCGACGGTGGATAATCCATCAAATGCAGTTGAATGGGGACTTTCTGAAATGGTAAATAAGCCTGGGCTACTTGAAAAGGCCATTGAAGAATTGGACAATGTTGTTGGTAAAGAAAGGCTAGTGCAAGAATCAGATATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCATTTCGTCTTCACCCCATTATAGATTTTAACATTCCCCATGTTTCAATGGCTGACACAGTTATTGCTAATAAGTACTTTATCCCAAAGGGTAGCCATGTGTTGTTAAGGAGACAAGGAGTTGGCCATAACTCAAGAGTTTGGGAAGAACCACTCGAGTTCAAACCAGAACGCCATCTTAGTATGAGTGGTTATGGGTCCAAATTCAATTTGGTCTTAGCAGAGCCAAGCTTGAAGCTGGTGACATTCAGCACTGGAAGATGCGGCTGCCCTGGACTCATTCTTGGAACTTCAATGACTATTATGTTGTTTGCTAGGTTGCTGCATAGCTTCACTTGGACTGTGCCACCAACTCACTCTAGCATTGACCTTTCTGAATCCGATGGAGATACCACCAAAGCTGAGCCTCTTGTGGCATTTGCAAAGCCTAGCCTTACGATTCTCCTAATGAAATTCCTAAAACACAACCACATCAAAAAACCAAGACTACCTCCAGGTCCCAAACCTTGGCCAATAATTGGCAATATTCCTGAACTGCTTGCAAATAAGTCTGGATTTAGATACATACAAAAAGTAATGAGTGATCTCAACACTGAAATTGCATGCATCCGTTTAGGCAATGTTCATGTGATCCCGGTGTCAAGTCCTGAAATTGCACGTGAACTCCTAATAAAACAGGATGCTGTTTTTGCCTCAAGGCCCATGAATTGGTCCAGTGAACATGTTTCACTTGGATATCTAACCACAGCTCTCTCTCCTTACGGAGAACAGTGGAAGAAAATGAAGAAAGTGGTCATCAACGAAATGCTTTCACCCCTCAAGCATGATTGGCTTCATGACAAGAGGGTCGAAGAAGCCGATAACCTTGTCCGCTATGTCTACAATCAGTGTAGAAATGGTGATGGTGGGGTGGTAAATGTTAGGGTTGCTGCACAACATTATTCTGGGAATGTGATAAGGAGGTTGATTTTCAATAGAAGGTACTTTGGAGAGGGTAGGGAAGATGGAGGACCCGGTGTTGAAGAAATGGAGCATATAGAAGCACTTTTCAATGTGTTGAAGTACCTTTTTGCCTTCTCTGTTTCTGATTACTTGCCATGCTTCAGGGGACTTGACTTGGATGGTCATAAAAAGAACCTGAAGAAGGCTTGTGAGGATGTGAGGAAATATCATGATCCAATTATTGAAGACAGAATTGAGCAATGGAAGAATGAGAAGAAGACAAATGAAGAAGACTTGCTTGATGTTCTCATCTCACTCAAAGATGCTGACAACAATCAACTTTTGACAATGGAGGAAATAAAATCTCAAATTCTGCCTGGGCTACTTGAAAAGGCCATTGAAGAATTGGACAATGTTGTTGGTAAAGAAAGGCTAGTGCAAGAATCAGATATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCATTTCGTCTTCACCCCATTATAGATTTTAACATTCCCCATGTTTCAATGGCTGACACAGTTATTGCTAATAAGTACTTTATCCCAAAGGGTAGCCATGTGTTGTTAAGGAGACAAGGAGTTGGCCATAACTCAAGAGTTTGGGAAGAACCACTCGAGTTCAAACCAGAACGCCATCTTAGTATGAGTGGTTATGGGTCCAAATTCAATTTGGTCTTAGCAGAGCCAAGCTTGAAGCTGGTGACATTCAGCACTGGAAGACGCGGCTGCCCTGGACTCATTCTTGGAACTTCAATGACTATTATGTTGTTTGCTAGGTTGCTGCATAGCTTCACTTGGACTGTGCCACCAACTCACTCTAGCATTGACCTTTCTGAATCCGATGGAGATACCACCAAAGCTGAGCCTCTTGTGGCATTTGCAAAGCCTAGGTTATCACCAGATGCTTATTTAATTTAA 3021 0.4184 MERAFVPHLLWSLIMLMLASLTILLMKFLKHNHIKKPRLPPGPKPWPIIGNIPELLANKSGFRYIQKVMSDLNTEIACIRLGNVHVIPVSSPEIARELLIKQDAVFASRPMNWSSEHVSLGYLTTALSPYGEQWKKMKKVVINEMLSPLKHDWLHDKRVEEADNLVRYVYNQCRNGDGGVVNVRVAAQHYSGNVIRRLIFNRRYFGEGREDGGPGVEEMEHIEALFNVLKYLFAFSVSDYLPCFRGLDLDGHKKNLKKACEDVRKYHDPIIEDRIEQWKNEKKTNEEDLLDVLISLKDADNNQLLTMEEIKSQILEMCIATVDNPSNAVEWGLSEMVNKPGLLEKAIEELDNVVGKERLVQESDIPKLNYVKACAREAFRLHPIIDFNIPHVSMADTVIANKYFIPKGSHVLLRRQGVGHNSRVWEEPLEFKPERHLSMSGYGSKFNLVLAEPSLKLVTFSTGRCGCPGLILGTSMTIMLFARLLHSFTWTVPPTHSSIDLSESDGDTTKAEPLVAFAKPSLTILLMKFLKHNHIKKPRLPPGPKPWPIIGNIPELLANKSGFRYIQKVMSDLNTEIACIRLGNVHVIPVSSPEIARELLIKQDAVFASRPMNWSSEHVSLGYLTTALSPYGEQWKKMKKVVINEMLSPLKHDWLHDKRVEEADNLVRYVYNQCRNGDGGVVNVRVAAQHYSGNVIRRLIFNRRYFGEGREDGGPGVEEMEHIEALFNVLKYLFAFSVSDYLPCFRGLDLDGHKKNLKKACEDVRKYHDPIIEDRIEQWKNEKKTNEEDLLDVLISLKDADNNQLLTMEEIKSQILPGLLEKAIEELDNVVGKERLVQESDIPKLNYVKACAREAFRLHPIIDFNIPHVSMADTVIANKYFIPKGSHVLLRRQGVGHNSRVWEEPLEFKPERHLSMSGYGSKFNLVLAEPSLKLVTFSTGRRGCPGLILGTSMTIMLFARLLHSFTWTVPPTHSSIDLSESDGDTTKAEPLVAFAKPRLSPDAYLI* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2341 1006 ProSitePatterns EF-hand calcium-binding domain. 298 310 IPR018247 -
Lja6g2341 1006 Gene3D Cytochrome P450 817 1002 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 817 1002 - -
Lja6g2341 1006 SUPERFAMILY Cytochrome P450 541 998 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 ProSitePatterns EF-hand calcium-binding domain. 799 811 IPR018247 -
Lja6g2341 1006 Gene3D Cytochrome P450 24 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 Gene3D Cytochrome P450 525 816 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 9 525 - -
Lja6g2341 1006 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 525 - -
Lja6g2341 1006 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 817 1002 - -
Lja6g2341 1006 Pfam Cytochrome P450 541 816 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 Pfam Cytochrome P450 817 978 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 Pfam Cytochrome P450 40 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 891 915 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 849 867 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 944 967 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PRINTS E-class P450 group I signature 934 944 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 524 816 - -
Lja6g2341 1006 SUPERFAMILY Cytochrome P450 40 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g2341 1006 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 937 946 IPR017972 GO:0005506|GO:0016705
Lja6g2341 1006 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 524 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2341 Lja-Chr6 52307618 52328243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2341 8 515 Cytochrome P450 AT4G39950 51.866 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2341 - K12153 adu:107486438 659.448