Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2332 ATGAAGAACATTGGCAATGTGGTGCAGGGGTTGAAGCCAACGTTGGTAATGGTGGGGGTGCAGATAGCAATGGCTGGGGTGAATGTGCTGCTCAAGCTCGCTGTAAACGATGGCATGAACTTGACGGTGGTTACTGCCTACCGATTTGTATTCGCCACTGCTTTCATAGCTCCACTTGCTCTCATCCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGATGCTGCTGTTTCAGTCATTTCTCTGTGGTTTATTTGGAGGAGCATCTCAAAACTTCTACTTAGAGTCTCTGGCTTTAACTTCAGTAACGTTTGCAGCCGCCATGTCTAACCTTACACCAGCCATAACCCTTATTATTGCCGCTTCCTTCAGATTGGAAAAAATAAATTTAGAAACTACAGCAGGGAAGGCTAAGATAGTGGGTACAATAACTGGAATTGGTGGGGCAATGGTTCTGACTTTGGTTAAAGGCAAGGAAATCAAGATAGAGTCCTTCCACGTGAACCTTTTGCACCCCCAAAACGGTACACATCCACACGCCGGTGGTACCGGTGAGAACCTCTTGGGTGCTCTTTGCAGCCTAGCCAGTGGCACCTCTTACTCATTGTGGCTCATTATTCAGAGAAAGATGACAGAAAGGTATGACGGTCATTACACAAGCACGGCGTTAATGTCGTTTTGGGCTTCAGTGCTATCCTTTGTGTTTGCTCTTTTCATTGAGAGAGATTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGACTCCTAACTGTTGCTTATGCGGGTATAGTGATCTCTGGACTGGTGGTGGTTGTAATTTCATGGTGTGTCCAGATGAGAGGCCCATTGTTTGTCGCTATTTTCAATCCTCTGGTGCTTGTGATTTTGGCCTTCGCTTGTTCTACGATATTGAATGAGAAGCTATATTGGAAGTGTTGA 936 0.4551 MKNIGNVVQGLKPTLVMVGVQIAMAGVNVLLKLAVNDGMNLTVVTAYRFVFATAFIAPLALILERKKRTKMTWMLLFQSFLCGLFGGASQNFYLESLALTSVTFAAAMSNLTPAITLIIAASFRLEKINLETTAGKAKIVGTITGIGGAMVLTLVKGKEIKIESFHVNLLHPQNGTHPHAGGTGENLLGALCSLASGTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERDWSQWRLGWNIRLLTVAYAGIVISGLVVVVISWCVQMRGPLFVAIFNPLVLVILAFACSTILNEKLYWKC* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2332 311 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020|GO:0016021
Lja6g2332 311 Pfam EamA-like transporter family 188 310 IPR000620 GO:0016020|GO:0016021
Lja6g2332 311 PANTHER WAT1-RELATED PROTEIN 13 309 IPR030184 GO:0016021|GO:0022857
Lja6g2332 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Lja6g2332 311 PANTHER WAT1-RELATED PROTEIN 13 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2332 Lja-Chr6 52193145 52200382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2332 11 308 Nodulin-like Gene Family AT1G25270 45.515 9.40e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2332 - - gmx:100810649 442.58