Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2331 ATGAAGGACATTGGCAATGTGGTGCAGGGGTTGAAGCCAACGTTGCTAATGGTGGTGGTGCAAATAGCATTTACTGGGCTGTATGTGCTGCTAAAGCTCGCCGCAGACGATGGCATGAGCTTAACGGTGCTTACTGCCTACAGAAATGTATTTGCTACAGCTTTCATAGCTCCACTTGCTCTCATCATTGAATGGAAGAAGAGGGCAAAGATGAATTGGACAGTGCTGTTTCAGTCATTTCTATGCGGTTTATTTGGAGGAGCATCTCAAATTTTTTACCTAGAGGGTTTGGCTTTAACTTCGGTAACGTTTGCAACTTCCATGTCCAACCTTGCACCAGCCATAACCCTTATCATAGCTGTTTCCTTCAGATTGGAAAAAATAAATCTAAAAACGACAGCAGGGAAGGCTAAGATAGTGGGTACAATAACTGGAATTGGTGGGGCAATGGTACTGACTTTGGTTAGAGGCAAGGAAATCAAGATAGGGTCCTTCCACATTAACATTTTGCATCACCAAAACGGCACGCACCCACACGCTAGTACCGGTGATAACCTCTTGGGTGCTCTTTGCAGCCTAGCCTATTGCACCTCTTATGCATTGTGGCTCATAGTTCAGAAAAAGATGACTAAAAGGTACCAGAGTCATTACACAAGCACCGCGTTAATTTCGTTTTGGGCTTCAGTGCTATCCATTGTGTTTGCTCTTTGCATTAAGAGAGATTGGAGTGAGTGGAGGTTGGGTTGGAATATTAGACTCCTAACTGTTGCTTATGCGGGTGCAGTGATTTCTGGACTGGTTGTGGTTGTAATGTCATGGTGTGTCCAGATGAGAGGCCCGTTTTTTTGTCTCTGTTTTCAATCCTCTGCCGCTTGTGATTTTAGCCTTCGCTGGTTCTACGATATTGAATGA 912 0.4441 MKDIGNVVQGLKPTLLMVVVQIAFTGLYVLLKLAADDGMSLTVLTAYRNVFATAFIAPLALIIEWKKRAKMNWTVLFQSFLCGLFGGASQIFYLEGLALTSVTFATSMSNLAPAITLIIAVSFRLEKINLKTTAGKAKIVGTITGIGGAMVLTLVRGKEIKIGSFHINILHHQNGTHPHASTGDNLLGALCSLAYCTSYALWLIVQKKMTKRYQSHYTSTALISFWASVLSIVFALCIKRDWSEWRLGWNIRLLTVAYAGAVISGLVVVVMSWCVQMRGPFFCLCFQSSAACDFSLRWFYDIE* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2331 303 PANTHER WAT1-RELATED PROTEIN 12 287 - -
Lja6g2331 303 PANTHER WAT1-RELATED PROTEIN 12 287 IPR030184 GO:0016021|GO:0022857
Lja6g2331 303 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Lja6g2331 303 Pfam EamA-like transporter family 13 140 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2331 Lja-Chr6 52185211 52189232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2331 11 287 Nodulin-like Gene Family AT1G25270 40.925 7.50e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2331 - - gmx:100810649 399.823