Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2323 ATGGCGTTTTGGTGGCCCTTGCTCGTTCTAGCATTCGCTTTCGCCATCTGCAAGTTCCTTCTGTTGCTCATTCCTCCCAAGGTTCCTTCCATCGACGTCGACACTTCCGATGTGTTGGATGACGGAAACCAAGCGCCGGAGAACGGTTACATCTATGTACCTCCGAGGGGAGCGGCGCAGCAATCAGGGAAGAAAGTTCAGTGTTATGAGCCTGCTACCATGAAGTATTTGGGATATGTTCCTGCATTGACCCCGGATGAGGTCAAGGAGCAGGTGGAGAAAGTGCGGAAGGCACAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCCAGTTTTTGCGTATACTTTTGAAATATATAATAAAACATCAAGCACTTATATGCGAAATATCTTCTCGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACGTGCGAGAAGATCAATTGGCTACTGTCAGAGGGTGAGCAGTGGCTAAAGCCTGAGTACCGATCCTCAGGAAGATCAATGATTCATAAGAGAGCCAAAGTAGAATTTCACCCCCTCGGTGTTATTGGTGCCATTGTGTCGTGGAACTATCCTTTCCACAATATTTTTAACCCTATGCTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATTTCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCCGTAGGAGCTCCGGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACTGGAGAAGCACTGGTGTCTTCTGCTGACAAGGTCATTTTTGTAGGATCACCTGGGGTTGGTAAAGTGATAATGAGAAATGCCGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGACGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGCGCTGGTGCTGAACGATTTTATGTCCACAAGAACATTTATTCATCTTTCATCAGCAAAGTTACCAAAATCTTTAAATCTGTTACAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCACGAGCATTCTGAAAAACTTGAAGGCCTAATAAATGACGCGCTAGAGAAAGGAGCTGAAATTGTTGCGCGTGGAAGTTTTGGACATATAGGAGAAGATGCAGTTTATCAATATTTTCCTCCTACTATGATTGTAAATGTGAATCACTCGATGAGATTGATGCAGGAAGAGGCATTTGGACCAATCATGCCGATAATGAAATTTAGCTCTGATGAAGAGGCTATCAAGCTTGCAAATGACTCAAAATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAGTCAAAGCCGTGCCAGAGAGATAACTTCCCAGATACATTGTGGGGTTGCTGCAGTTAATGATTTTGCATCATCGTACATGTGTCAGTCCCTGCCATTTGGGGGTGTGAAACACAGTGGATTTGGACGATTCGGCGGTGTAGAAGGTTTACGGGCATGTTGCCTTGTAAAATCAGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCAAGATACCTAAGCCAATTCAGTATCCTGTAGCAGAAAATGGATTTGAGTTTCAGGAGTCACTTGTTGAAGCATTGTATGGGCTTAGCATATGGGACCGTTTGCAAGCATTGGTCACCGTTTTGAAAATGCTTACTGAGAAGAACTCCACCAATAGCAGCAAGAAGGAGAAATGA 1788 0.443 MAFWWPLLVLAFAFAICKFLLLLIPPKVPSIDVDTSDVLDDGNQAPENGYIYVPPRGAAQQSGKKVQCYEPATMKYLGYVPALTPDEVKEQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMIHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAVGAPEDLVEVITGFAETGEALVSSADKVIFVGSPGVGKVIMRNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHKNIYSSFISKVTKIFKSVTAGPPLAGKYDMGALCMHEHSEKLEGLINDALEKGAEIVARGSFGHIGEDAVYQYFPPTMIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEAIKLANDSKYGLGCAVFSGSQSRAREITSQIHCGVAAVNDFASSYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVTVLKMLTEKNSTNSSKKEK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2323 595 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Lja6g2323 595 SUPERFAMILY ALDH-like 60 532 IPR016161 GO:0016491
Lja6g2323 595 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Lja6g2323 595 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Lja6g2323 595 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Lja6g2323 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Lja6g2323 595 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Lja6g2323 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Lja6g2323 595 CDD ALDH_F15-22 69 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2323 Lja-Chr6 52115950 52122149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2323 1 595 Aldehyde Dehydrogenase Gene Family AT3G66658 79.664 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2323 - - gmx:100802990 1095.11