Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2318 ATGGAAGAGTCTTGCCATTTCAGGGAGTTAACTCCTAGTGCAGTTGAGGACAATTTGAGTTCATCCAATGGTATTTTATGGGCTTCCAATGAGGGACTGAATGAGATGAAAAATGTTCAATTTTCTAAAGAGACTGGGGGAATTGACTCACTTTGCCTTGATTTTGAGTTATTTCCAGAAAAAGAAGGGTTACTTCTATCCACTGATCAACAGAAGGATCACCAACAACCATCATATGAACAATTAGATAACCTCAGGTTTGACATGGTTTCTTCACCACATCAAAATCAAGTGGAGGGTGTCATGAAATTTGATGAAAATTTTCCAACCAAGTTTCGATACCCTGGAAAGAACAAGCAATACACAACTCCTTTAGCGCCAGTTGAGATCTTGAAGAAATATGGCAAGGGCTTCAAGAGGTTATGTGATGAAGGAAAAATCCTGCATCCAGTTGTTGATTCTTCTGCTGTGATCACAAATGATGATGGGAGGATGAAGCTTTCAACTGAAGATGTCATGAGGGTAGCTGGAACAAGGGCCATCCAATCAGCTTCAGAATCACCAGGTTTGGACCTCTTGGTTACTCACCCTTTTGGCTTTTCATTCTCTGAACTCTATGCTGAAGAGAAAGAGGATGTGGCACTTGCTGAATCACTCTTGTCTTGTGCTGAGAAAGTTGGCTACCAACAGTTTGAACGGGCAAGAAAATTGCTCAGTCATTGCAAATCTTTCTCTTCCAAGACAGCTAGTCCTGTAAAACGTGTTGTTCATTATTTTGCTGAAGCTCTTCACCATAGGATAGATAAAGAAACAGGGAGAGTTTCATCCAAGGAAATGCAAGAGATGAAACCATTTGATCCTGAAGTGTTAAGCAAAGGTACTCTAAACCCCACTGTTTATGCATTTTATGAAGTGCTTCCTTTCGTTCAGGTTACCATGTTCACAGCAGTGCAAGCTATCATAGAGAATGTAACTGAGGCAAAAAAGATTCACTTGATAGATCTTGAAATCAGAAAGGGTGCACAATGGACTACCCTGATGCATGCCCTTGAATCAAGACATGACTGTCCAGTTGAGCTTCTTAAGATAACAGCTGTTGGAAGTGGAACCACATCAAGGCGTGAAATTGAGGACACTGGTGAGAGTTTGAAGGACTATGCTCATAGCTTGAACATACCCTTCTCTTTCAGTGTAGTTATGGTATCAGAAATGCTTAGTGTAGATCAGTTTGAAATAGACCCTGAGGAAACAGTTGCAGTTTACTCTCAGTTTGCTATTAGAAGCAAGATTCTACAATCAGAACAGCTTGAATCTATCATGAGGGTGGTTAGAACCATTAGGCCTGTTGTGATGGTGGTGGCTGAAATTGAAGCTAATCACAATTCAACATCATTTGTGAAACGCTTCATCGAAGCTCTTTTTTACTTCAGTGCATTCTTTGATTGTTTAGAGGCTTGTATGAAACATGATGAACAGAACAGGATGATGATAGAATCACTGTTTGGTCATGGAATCAGGAACATTGTGGCTGCAGAAGGAGCAGAAAGAAAGCATAGAAATGTTACAATTGATGTGTGGAGGGAATTTTTCTCTCGGTTTGGGATGGAGGAGACTGAATTGAGCAGGGTGTCTTTGTACCAAGCGGATTTGGTGGCTAAGAGGTTTCCTTGTGGAAGTTGCAGCACATTTCATATGAACGGGCATTGCCTTCTCGTTGGGTGGAAGGGAACGCCGATTAGCTCAGTTTCTGTGTGGAAATTCACCTAA 1767 0.4114 MEESCHFRELTPSAVEDNLSSSNGILWASNEGLNEMKNVQFSKETGGIDSLCLDFELFPEKEGLLLSTDQQKDHQQPSYEQLDNLRFDMVSSPHQNQVEGVMKFDENFPTKFRYPGKNKQYTTPLAPVEILKKYGKGFKRLCDEGKILHPVVDSSAVITNDDGRMKLSTEDVMRVAGTRAIQSASESPGLDLLVTHPFGFSFSELYAEEKEDVALAESLLSCAEKVGYQQFERARKLLSHCKSFSSKTASPVKRVVHYFAEALHHRIDKETGRVSSKEMQEMKPFDPEVLSKGTLNPTVYAFYEVLPFVQVTMFTAVQAIIENVTEAKKIHLIDLEIRKGAQWTTLMHALESRHDCPVELLKITAVGSGTTSRREIEDTGESLKDYAHSLNIPFSFSVVMVSEMLSVDQFEIDPEETVAVYSQFAIRSKILQSEQLESIMRVVRTIRPVVMVVAEIEANHNSTSFVKRFIEALFYFSAFFDCLEACMKHDEQNRMMIESLFGHGIRNIVAAEGAERKHRNVTIDVWREFFSRFGMEETELSRVSLYQADLVAKRFPCGSCSTFHMNGHCLLVGWKGTPISSVSVWKFT* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2318 588 Pfam GRAS domain family 216 586 IPR005202 -
Lja6g2318 588 ProSiteProfiles GRAS family profile. 206 586 IPR005202 -
Lja6g2318 588 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 38 586 - -
Lja6g2318 588 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2318 Lja-Chr6 52099957 52101951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2318 205 588 GRAS Transcription Factor Family AT3G03450 31.443 2.24e-59 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja6g2318 GRAS 1.6e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2318 - - gmx:100818523 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2318 6 52099957 52101951 Lja6g2318 6 52099957 52101951 ECH