Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2317 ATGGAAGAGTATTACCATTTCATGGAGTTAAGTCCAAGTGCAGTTGAGGACAAGTTTAGTTCATCCAATGATATTTTATGGGCTACTGATGTAGGACTCAATGAGATGAAAAAGGTTCAATTTTCTGCAGAGTGTGGAGGAATTGACTCACCTTGCCTTGATTATGGGTTCCTTTCAAATGATCCTTCAGAAGAAGAAGCAAGGTTCCTTCTATCCACTGATCAACCGAAGGATCACCAACAACCATCATATGAACCATGGGATAACCTCAGGTTTGACATGGTTTCTTCACCACTCCAAATACAAGTGGAGGATATCATGCAGATTGATGAAAACTTTTCAACCAAGGTTCCACTTTTTTACCCTGCAAAGAACAAGCAATTCCCTACTCCTTTAGCCCCAATTGAGATCTTGAAGCACTATGGCAAGGGCTTCAAGAGGTTATGTGATGAAGGAAAAATCCTGCATCCACTTGATGATTCTTCTGCAGTGATCACTAATGTTGATGGGAGGAAGCTTTCAACTGAAGATGTCATGAGGGTAGCTGGAACAAAGTTCATCCATTCAGCTTCAGAATCACCTGGTTTGGACCTCTTAGTTACTCACCCTTTTGGTTTTTCTTTCTCTGAACTCTCTATTGAAGAGAAAGAAGATGCAGAACTTGCTGAATCACTCTTGTCTTGTGCTGAGAAAATTGGCTACCAACAATATGAACGCGCTAGCAAATTGCTTAGTCACTGCAAATCCTTAACTTCCAATAGAGGAGGCCCTGTGAAACGTGTTGTTCATTATTTTGCTGAAGCTCTTCAGCACATGATAGATAAAGAAACAGGAAGAGTTTCAATCAAGGAAATGCAAGAGATACAAAAACATGATCCTGAAGAGTTAACCAAGGATCTAAACCCCATTACTCTTTTATTCTATGAAAGGCTTCCTTTTTGTCAGATTAGCATGTTCACAGGAGTACAAGCTATCATAGAGAATGTAACTGAGGCCAAAAAGATTCACTTGATTGATCTTGAAATCAGAAAGGGTGCACAGTGGACAACCCTGATGCATGCCCTTGAGTCAAGACATGATTGTCCACTTGAGCTTCTTAAGATAACAGCTATTGGAAGTGGAACCACTTCAAGGCATGAAATTGAGGACACTGGTGAGAAATTGAAGGTTTTTGCAAAAAGCTTGAACATACCCTTTTCTTTCAATGTAGTTATTGTTTCAGACATGGTGGATATTATTACAGAAGATGTTTTTGTAATAGACCCTGAGGAAACAGTTGCAGTTTACTCTCAGTTTGCAATCAGATGCAAGATTCAAGAACCAAACCAGCTTGAAGCTATCATGAGAATGGTTAGAACACTTAAACCTGTTGTGATGGTGGTGGCTGAAATTGAAGCTAACCACAACTCAACATCTTTTGTGAAACGTTTCACTGAGGCTCTTTTCTACTTCAGTGCATTCTTTGATTGTCTGGAGGCTTGTATGAAACATGATGAACAGAACAGAATTATGATAGAAACACTGTTGGGTCATGGAATCAGGAGCATTGTGGCTGAGAGAAAGAGTAGAAATGTTAAGATTGATGTGTGGAGGGCATATTTCTCACGGTTTGGAATGGAGGAGACAGAGTTGAGCAGGGTGTCTTTGTATCAAGCAGATTTGGTAGCTAAGAGGTTTCCTAGTGGAAGTTGCTGCACATTTCATATGGATGGGCATTGCCTTCTTGTTGGGTGGAAGGGAACACCAATTAGCTCTGTTTCTGTGTGGAAATTCACTTGA 1779 0.4025 MEEYYHFMELSPSAVEDKFSSSNDILWATDVGLNEMKKVQFSAECGGIDSPCLDYGFLSNDPSEEEARFLLSTDQPKDHQQPSYEPWDNLRFDMVSSPLQIQVEDIMQIDENFSTKVPLFYPAKNKQFPTPLAPIEILKHYGKGFKRLCDEGKILHPLDDSSAVITNVDGRKLSTEDVMRVAGTKFIHSASESPGLDLLVTHPFGFSFSELSIEEKEDAELAESLLSCAEKIGYQQYERASKLLSHCKSLTSNRGGPVKRVVHYFAEALQHMIDKETGRVSIKEMQEIQKHDPEELTKDLNPITLLFYERLPFCQISMFTGVQAIIENVTEAKKIHLIDLEIRKGAQWTTLMHALESRHDCPLELLKITAIGSGTTSRHEIEDTGEKLKVFAKSLNIPFSFNVVIVSDMVDIITEDVFVIDPEETVAVYSQFAIRCKIQEPNQLEAIMRMVRTLKPVVMVVAEIEANHNSTSFVKRFTEALFYFSAFFDCLEACMKHDEQNRIMIETLLGHGIRSIVAERKSRNVKIDVWRAYFSRFGMEETELSRVSLYQADLVAKRFPSGSCCTFHMDGHCLLVGWKGTPISSVSVWKFT* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2317 592 ProSiteProfiles GRAS family profile. 212 590 IPR005202 -
Lja6g2317 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 39 590 IPR005202 -
Lja6g2317 592 Pfam GRAS domain family 222 590 IPR005202 -
Lja6g2317 592 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 39 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2317 Lja-Chr6 52096688 52098614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2317 221 592 GRAS Transcription Factor Family AT1G66350 30.053 5.94e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja6g2317 GRAS 2.2e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2317 - - gmx:100818523 695.271