Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2293 ATGGGAGTTGAAAAAGAAGGGACAAAGAATGGAGGATATGTTGGTGGTTTTCTCCACTTGTTTGACTGGACCTCGAAACCCCGTAAGAAATTATTTGCATCCAAGTCAGATTTACCAGAGCCTATGAAGAAGGAAAGAAAAGCCGATTACAATGTGGCACCCTATCTGATGGATGATGATGAAAATGGAGTAGGTGCAAGTGCTAGAGGAAGCTGTGATCATAGCTATGCTTCATCTGTTACAGATGATGAAGCATATGGAACAAGGCCCCCCAGCGTAGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTCCTTCCAGTTTTTCTGATCCGTATGGCACTCCATATTCTGATACTCGATCCCTTCAAGATGCTCAGTACTTCAGGAAAAACCTCAGTCATCAGCACGATTGTCAGGCTTTATATTCTGGAAACCTCGTCGAAAAGATTGAGGGCTCTTCTAGGAACTTTATGGAGCCAAAACCTCAAAAGACCATTACCAGGCCAATTGAAAAGTTCCAAACTGAAGTACTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCACAAACTTTTGTCTCCTATTAAGACTCCTGGCTTTGTTCCAACAAACAATGCCGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAACCTGGATCCCAAGCTAGTGGAAAGGCTAGAGCACTGCTGGCATCATCATCAACAACATCACTGAGGGTTAAAGATCTCAATAAGTTTGAGCCTTCGCCAAAAGGACCTTTAATTGGGCCATCTTCCATGACCTCTAGAGTTCGAGATCTTAAAGAAAAAAGAGAAACTTCTCAGAGAACAACCAGGCTTTCAGAAACTTCACATAGGCCAGTTGAATCAAATGCTGTCAAGTATTTAAAAGGACAATCTTTGAACAGAAGCTGGAATGGATCTGTGGATGCAACCATCAGACCTCCTTCACATGCAGAAGAAGATTCTTCTTCGAAGAAAAAGGGGAGATCTATTTCACTTGCGATCCAAGCGAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTGGTGGCAAAAGTTTGACGGGCCAAAAAGAGCATCTTGACAGTAAATCCAATCAACCATCAAGGGCAAATGTTCAGAGAAATTTGCATAAGAAATCTTCTGGTCAGAATTCTTCTGGTGTTCTCAGGCAGAATAATCTGAAACAAAACTATTCAATTGATAAAGACAAATTACCATCAAAGCCATCAGTTTCCAATTCACAAGGTAGAAAAGTTCCGAATGGGGATTCCTCGTATGGACGTCATAGAAGCTCTAGTGGTAAATCCATTGCAAAATCTAAAGTTGGATCCAAAAAGTCAGCCATGGAGGTGACAGACAGTGAAAAGGAAGTTTTGTATACAAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACTGACAAGGACTGGAATGATAGGGCTGTGGATAATTTGTTCATTGACAAAACTCCGAAGCCTGTTAAGTCTAATCAAGTGAGCAATAAACAATATGGTTGGGGTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCACACCATTAGCAAGGAGCAATCCATGTTTTGAGACATCTGGACAAGCTAGCCAGAATTATAACGGTCCTTCATTGGATCAACGCATTAAAAGAGTGTTGCTTGACACAGACAATTCAAGGTCTCCAATAGGATACAATGTAATTGGTGGCGATGCCTTAGGTATCCTTTTGGAACAGAAGCTGAGGGAATTAACTGGTGGAGTTGAAGCCTCTTCTGATGACGTTTCTAAAGTGAGGCAACCTTCCGTTTCTGCACCGATGTCTGATGGCCAAGTAACCAACCTCAACTGGAGATTGCAACAGAACAAGGACCAAGATGTGTTGTCTACAAACAAGTTAAGCAGTAGCCATGATTCTGACATCTCCTTCAGTAGTCTTCCTGAATTATCATTGAAACACAACTCATGGGTTGATGAAATGGAACCACAGTTATTCAATTGCCGAGAACCAAGTCCAATCTCTGTTCTTGAGCCATCTTTTTCAATTGAAAGCTATGATTCCTCAATGAGCACGGACTTTACTAGTACGGAAGGAAGCAAGTTGTATTCAACTGTTCAAGTTCAGGAAGTTCATGGCTTGAATTTTTCAAGGAACTTCTATATTAATGAATATGACACTGAGTTATCTGATTCTGCTTCTTCAACATCAACTGGGACCATGGTGAAGAAGCACACAGGTACATTTTCTGCAATGAAGTTTGGAAGATCAAATACATGGGAGTTGGACTATGTTAAAGATATTTTGTGCAATGTTGAGTTGATGTATATGGATTTTTCCCTTGGTCGAGCTCGCGAGATTGTAAACCCTCATTTATTCAACCAGTTGGAAAGCCGAAAGGGTGGATTTAAGAGTGATGCTGAATCTAGGATTCAGAGGAAAGTTATATTTGATTGTGTGAGTGAGTGTATGGACTTAAGATGCCGGCGTTATGTAGGTGGAGGATACAAAATGTGGACTAAAGGGGTTGCAATGGTGAAGAGAAAGGAATGGTTAGCAGAAGATGTGTACAAGGAAATTTCAGGGTGGAGAGGGATGGGGGATTCAATGGTAGATGAGCTTGTGGAAAAGGACATGAGCAGCCAATATGGAAAGTGGCTAGATTTCGAGGTTGATGGTTTTGAACTTGGCACAGAGGTTGTGGACCAAATAGTTAATTCTTTGTTTGATGATGTTGTCACTGAAATCTTGCAATTGTAA 2778 0.4093 MGVEKEGTKNGGYVGGFLHLFDWTSKPRKKLFASKSDLPEPMKKERKADYNVAPYLMDDDENGVGASARGSCDHSYASSVTDDEAYGTRPPSVVARLMGLDSLPPSSFSDPYGTPYSDTRSLQDAQYFRKNLSHQHDCQALYSGNLVEKIEGSSRNFMEPKPQKTITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKTPGFVPTNNAAYIMEAAARIIEPGSQASGKARALLASSSTTSLRVKDLNKFEPSPKGPLIGPSSMTSRVRDLKEKRETSQRTTRLSETSHRPVESNAVKYLKGQSLNRSWNGSVDATIRPPSHAEEDSSSKKKGRSISLAIQAKVNVQRREGLSGGKSLTGQKEHLDSKSNQPSRANVQRNLHKKSSGQNSSGVLRQNNLKQNYSIDKDKLPSKPSVSNSQGRKVPNGDSSYGRHRSSSGKSIAKSKVGSKKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRAVDNLFIDKTPKPVKSNQVSNKQYGWGEEVKKKDMDVVSFTFTTPLARSNPCFETSGQASQNYNGPSLDQRIKRVLLDTDNSRSPIGYNVIGGDALGILLEQKLRELTGGVEASSDDVSKVRQPSVSAPMSDGQVTNLNWRLQQNKDQDVLSTNKLSSSHDSDISFSSLPELSLKHNSWVDEMEPQLFNCREPSPISVLEPSFSIESYDSSMSTDFTSTEGSKLYSTVQVQEVHGLNFSRNFYINEYDTELSDSASSTSTGTMVKKHTGTFSAMKFGRSNTWELDYVKDILCNVELMYMDFSLGRAREIVNPHLFNQLESRKGGFKSDAESRIQRKVIFDCVSECMDLRCRRYVGGGYKMWTKGVAMVKRKEWLAEDVYKEISGWRGMGDSMVDELVEKDMSSQYGKWLDFEVDGFELGTEVVDQIVNSLFDDVVTEILQL* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2293 925 MobiDBLite consensus disorder prediction 369 404 - -
Lja6g2293 925 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Lja6g2293 925 MobiDBLite consensus disorder prediction 308 458 - -
Lja6g2293 925 MobiDBLite consensus disorder prediction 64 88 - -
Lja6g2293 925 MobiDBLite consensus disorder prediction 602 617 - -
Lja6g2293 925 MobiDBLite consensus disorder prediction 410 444 - -
Lja6g2293 925 PANTHER EXPRESSED PROTEIN 1 247 - -
Lja6g2293 925 PANTHER EXPRESSED PROTEIN 253 923 - -
Lja6g2293 925 MobiDBLite consensus disorder prediction 266 286 - -
Lja6g2293 925 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 247 - -
Lja6g2293 925 Pfam Domain of unknown function (DUF4378) 767 916 IPR025486 -
Lja6g2293 925 MobiDBLite consensus disorder prediction 244 295 - -
Lja6g2293 925 MobiDBLite consensus disorder prediction 595 617 - -
Lja6g2293 925 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 253 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2293 Lja-Chr6 51875863 51880855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2293 15 923 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.303 5.41e-91 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2293 - - gmx:100777900 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2293 6 51875863 51880855 Lja6g2293 6 51875863 51880855 ECH