Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2270 ATGGGACAAGAATCAGAGTACAAAACCCAGTTGGTGTTGAAGATTTGCTCCATTTCCACCCGTTCTGTTGTTTGTGTTCACAGGCTTGTTTCAGACTCAGTTAAGGCACCTTTCATTGATTGGTATTGCATTCTTGGAGTGGAAGAGAATGTAGGAGTACATACCATTCGTAAGAAATACCATAAACTTGCTTTGCAACTTCATCCAGACAAGAATAAACACCCCAAGGCTGATACTGCATTCAAGCTTGTTTCTGAGGCCTATAGATGCTTATCTGATGCTGCAAAAAGAAAAGCTTTTAACTTGAAGAGACATGAGAGCTTCTGCATTCAGTGCAACAGAATCCCTTACACATCAACCATTGTCCCTGGCAATTCCATTAACGGTTCAAGTTTCAAGCCATGGAACATTATCAGCAGGTCAATATCTAGTAAGGTTCGGAGAAACATTCGGGACATGAGAGAAAGATTGAAGGAGGAAGCTAAGGTGATAGAAAACTGTCTGAAGGCAAATTCACTGTCAAAGAAAGAATCTTCCGTTTACAATCCAGCAGAGTATCTACACGGAAAAAGGTCCTCTTTTCAGAGAGAAAGCCCTGTTTTCAATCCATCAAACTACTTCTACCAAGGGTACCCTCATCATCCAAGGGGAAATGTTTACAAGAATTCTGAGACATGTTGTTACTTGCAGGCAGAAAAAATAGTGCATAGTGACAAGGGAGGATCTAAATATGCCTCCCCAGTTTTTGAGGTGAAATCACAAAGGAATATGATGAGCACTAGGAAATTTGCTTATGTTCCATCACAATGTTAG 813 0.4047 MGQESEYKTQLVLKICSISTRSVVCVHRLVSDSVKAPFIDWYCILGVEENVGVHTIRKKYHKLALQLHPDKNKHPKADTAFKLVSEAYRCLSDAAKRKAFNLKRHESFCIQCNRIPYTSTIVPGNSINGSSFKPWNIISRSISSKVRRNIRDMRERLKEEAKVIENCLKANSLSKKESSVYNPAEYLHGKRSSFQRESPVFNPSNYFYQGYPHHPRGNVYKNSETCCYLQAEKIVHSDKGGSKYASPVFEVKSQRNMMSTRKFAYVPSQC* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2270 270 SMART dnaj_3 39 96 IPR001623 -
Lja6g2270 270 CDD DnaJ 40 93 IPR001623 -
Lja6g2270 270 SUPERFAMILY Chaperone J-domain 31 106 IPR036869 -
Lja6g2270 270 Gene3D DnaJ domain 39 158 IPR036869 -
Lja6g2270 270 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lja6g2270 270 PRINTS DnaJ domain signature 60 75 IPR001623 -
Lja6g2270 270 PRINTS DnaJ domain signature 42 60 IPR001623 -
Lja6g2270 270 PANTHER BNAC03G44070D PROTEIN 4 261 - -
Lja6g2270 270 Pfam DnaJ domain 40 101 IPR001623 -
Lja6g2270 270 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 261 - -
Lja6g2270 270 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2270 Lja-Chr6 51577711 51579233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2270 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 1.47e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2270 - - gmx:100778573 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2270 6 51577711 51579233 Lja6g2270 6 51577711 51579233 ECH
Lja4g1318 4 11760897 11762226 Lja6g2270 6 51577711 51579233 PCT