Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2264 ATGGCGACGGAGCAGTTAATGGTCGCTGGCGGCCCCCGCTATGTTCAAATGAAATCGTCGCCGCCGCCCTCGCCTCCGGCTCCGGGAGAGATTTTGCCGGCACCGTCGTTCCGGCAGGGAGGTGCTGAGCCTAATCGGATTTTCGATGAATTGCCGAAAGCTACAATTGTCTCCGTTTCTCGTCCTGACGCCGGTGATATTAGCCCCATGCAACTCTCTTACACAATTCAGGTTCAGTACAAACAGTTCAAGTGGGAACTTGTGAAGAAGGCTCATCAAGTATTTATTTTGCATTTTGCCTTAAAGAAACGTGCCTTTTTTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACACTGCTATGGTGCAAGATGATGATGACGCTGATGAGGATTCGGTTCCTTTACATACAGATGAAAGTGCTAAAAACAGAGATGTTCCATCAAGTGCCGCTCTACCAATTATACGACCGGCTTTAGGACGGCAGCAGTCTATTGCAGACAGGGCAAAGAGTGCAATGCAAGGGTATCTAAATCACTTTTTGGGAAATATCAGTTTAGTTAACTCTCGAGAGGTTTGCAAGTTTTTGGAAGTATCCATGTTGTCTTTTTCACCTGAATATGGCCCGAAGCTGAAGGAAGAATATGTAATGGTGAAGCATCTGCCTAAAATTCCAAAAGATGATGATTCCAGAAAGTGTTGTATGTCTAGCTGTTTTAGTTGTTGCAATGACAACTGGCAAAAGGTGTGGGCTGTACTAAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTCTGATACACAGCCCTTGGACATTATTGTTTTTGATGTACTGCCTGCCTCAGATAGGAATGGGGATGGTCGTCTATCACTAGCAAGCGAAATGAAGGAGCGGAATCCTTTACGCCATTCATTCAAGGTTACTTGTGGACTTCGGAGCATTAGAATTAGAGTGAGAAGTAGTAGTAAAGTTAAAGATTGGGTAGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGCTATGGTTCTTTTGCTCCTCCTAGAGGCTTAATTGAAGATGATAGTCAAGCCCAATGGTTTGTGGATGGGCAAGCAGCATTTGATGCGATTGCTTCTTCAATTGAGGATGCAAAATCAGAGATATTTATCTGTGGATGGTGGCTGTGCCCAGAATTGTATCTACGGCGGCCTTTCCACGCTCACACTTCAGCAAGGCTTGATAATTTGTTGGAAGCAAAAGCCAAGCAAGGGGTTCAGATTTATATTCTGCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTGTTGATCACCATATTTGCTTTATTGGAGGTCTGGATTTATGCTTTGGTCGTTATGACACACCTGAGCATAAAGTGGGGGATTTCCCTCCTGTAATGTGGCCTGGAAAGGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACTATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCCTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAGCAAAGCCCCAAATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGTAGCGAGATACAGATTGAAAGCAAGAACACTGACAACCAGAGAGTTATCAAGAGAGAAGATTCTTTTTCCTCATCTTCCCAAGATCAAGACATTCCTCTACTTTTGCCTCAAGAGTCTGATGGGTTGACTTCTCCTGAAGGAAACCCTAAACCTAATGGGCTGATCTCCTTTTTACATCACATTGACAAGCCAAGAAAGAATAGCAATGGTCTTCCTTTCTCATTTCGAAAGGACAAAGCTGCAGCAGTTGGTCTAGATACACCAATGAAGGGCTTTGTGGATGATCTTGGTTCTGTGCATTATCATGAAAAAAAGTCTGCGGATAGATTGGGTCATGTTGATTTACAAGATACAGATCGAGAATGGTGGGAAACACAAGAACGGGGTGATCAGGGAGGTTTTGCTGGTGACTCAGGACAAATTGGTCCTCGTGCTTCCTGCCGTTGTCAGGTCATTAGGAGTGTCAGTCAATGGTCTGCTGGAACAAGCCAAAATGAGGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCTGGAGATGAGATGATACGCAATCGTGTTTTAGAAGCTTTACATCGACGGATTATGCGAGCTTACAATGACAAAAAATCTTTCAGAGTTATAGTTGTCATACCTCTCCTGCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACTATTTGCAGAGGGCAGAATTCTATCTTACACAATCTTTACGAACTTCTTGGTTCAAGAATACATGATTATATCTCATTTTACGGCCTGAGGTCTTATGGTAGACTCTCTGACGGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTATTGATGATTGTGTAAGTTTGATTGGATCGGCTAATATTAATGATAGGAGCTTACTTGGTTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAGAGAGTTAATTGATTCTTATATGGACGGGAAGCCTTGGAAAGCAGGAAAGTTTTCTTTGACTCTCAGATTATCATTATGGTCTGAGCACCTGGGTCTCCCGGCAGGAGAGGTCAATCAAATAATGGACCCAGTTATTGAGTCTACTTACAAGGATATTTGGATGACAGTCGCAAAGACAAATACTGCAATTTATCAGGATGTCTTTTCTTGCGTGCCTAATGATCTGATTCACACCAGACTTGCTTTCAGACAAAGCGTGGCTTTTTGGAAAGAAAAAGTTGGTCACACAACCATTGATTTAGGAATAGCCCCAAAAAACTTAGAATCCTACGATGATGGAAATATCAAGAACACGGATCCCTTGGAGAGATTAACATCAGTTAGGGGTCATCTTGTTTCTTTTCCTTTGGAGTTCATGTGTCAAGAAAGTCTAAGACCTGCTTTTAATGAAAGTGAATACTACGCTACTCAAGTTTTCCACTGA 3357 0.4278 MATEQLMVAGGPRYVQMKSSPPPSPPAPGEILPAPSFRQGGAEPNRIFDELPKATIVSVSRPDAGDISPMQLSYTIQVQYKQFKWELVKKAHQVFILHFALKKRAFFEEIHEKQEQVKEWLQNLGIGEHTAMVQDDDDADEDSVPLHTDESAKNRDVPSSAALPIIRPALGRQQSIADRAKSAMQGYLNHFLGNISLVNSREVCKFLEVSMLSFSPEYGPKLKEEYVMVKHLPKIPKDDDSRKCCMSSCFSCCNDNWQKVWAVLKPGFLALLADPSDTQPLDIIVFDVLPASDRNGDGRLSLASEMKERNPLRHSFKVTCGLRSIRIRVRSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFVDGQAAFDAIASSIEDAKSEIFICGWWLCPELYLRRPFHAHTSARLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDHHICFIGGLDLCFGRYDTPEHKVGDFPPVMWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRSKAPNEQAIPLLMPQHHMVIPHYLGRSSEIQIESKNTDNQRVIKREDSFSSSSQDQDIPLLLPQESDGLTSPEGNPKPNGLISFLHHIDKPRKNSNGLPFSFRKDKAAAVGLDTPMKGFVDDLGSVHYHEKKSADRLGHVDLQDTDREWWETQERGDQGGFAGDSGQIGPRASCRCQVIRSVSQWSAGTSQNEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALHRRIMRAYNDKKSFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSRIHDYISFYGLRSYGRLSDGGPVATSQVYVHSKIMIIDDCVSLIGSANINDRSLLGSRDSEIGVVIEDRELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLPAGEVNQIMDPVIESTYKDIWMTVAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVAFWKEKVGHTTIDLGIAPKNLESYDDGNIKNTDPLERLTSVRGHLVSFPLEFMCQESLRPAFNESEYYATQVFH* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2264 1118 SUPERFAMILY Phospholipase D/nuclease 757 966 - -
Lja6g2264 1118 SMART PH_update 221 349 IPR001849 -
Lja6g2264 1118 Pfam PLD-like domain 789 964 IPR025202 -
Lja6g2264 1118 Pfam Phospholipase D Active site motif 482 509 IPR001736 GO:0003824
Lja6g2264 1118 SUPERFAMILY Phospholipase D/nuclease 334 601 - -
Lja6g2264 1118 Gene3D Endonuclease Chain A 367 608 - -
Lja6g2264 1118 Gene3D Endonuclease Chain A 738 975 - -
Lja6g2264 1118 MobiDBLite consensus disorder prediction 633 667 - -
Lja6g2264 1118 CDD PLDc_vPLD1_2_yPLD_like_2 775 959 - -
Lja6g2264 1118 Gene3D - 249 347 IPR011993 -
Lja6g2264 1118 CDD PLDc_vPLD1_2_yPLD_like_1 375 519 - -
Lja6g2264 1118 SMART pld_4 915 942 IPR001736 GO:0003824
Lja6g2264 1118 SMART pld_4 482 509 IPR001736 GO:0003824
Lja6g2264 1118 CDD PH_PLD 198 345 - -
Lja6g2264 1118 SUPERFAMILY PH domain-like 253 345 - -
Lja6g2264 1118 MobiDBLite consensus disorder prediction 13 39 - -
Lja6g2264 1118 PANTHER PHOSPHOLIPASE D 34 1115 IPR015679 -
Lja6g2264 1118 PIRSF PLD_euk 59 615 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lja6g2264 1118 PIRSF PLD_euk 608 1118 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lja6g2264 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 482 509 IPR001736 GO:0003824
Lja6g2264 1118 MobiDBLite consensus disorder prediction 18 32 - -
Lja6g2264 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 915 942 IPR001736 GO:0003824
Lja6g2264 1118 PANTHER PHOSPHOLIPASE 34 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2264 Lja-Chr6 51525952 51536853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2264 1 999 Phospholipase D Gene Family (Wang group) AT3G16785 73.207 0.0 1408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2264 K01115 - gmx:100780514 2019.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2264 6 51525952 51536853 Lja6g2264 6 51525952 51536853 ECH