Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2231 ATGCCGCAGGCCAATGCCGCTGCACTGTATGACCACGCCGCCGCATCCGATGCCGGCGACGCTGTCATGGCGCGCTGGCTTCAGTCCGCCGGCTTGCAGCATCTGGCTTCCCCCATCGCTTCCTCCGGCATCGACCAGCGCCTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCGCAGTCTGCCGAAGAGAAGCAGAGGCTTTTGAAGTTGATGAGAAACCTCAATTTCAATGGGGAATCTGGTTCGGAGCCATATACGCCCACCACCCAAACTTTAGGTGGAGTGGCTGGATCAGATGGGTTTTATTCTCCTGAGTTCAGGGGGGATTTTGGAGCCGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTTATTTCAGAACCTTTTGAACCTTCACCCTTCATGCCTGGAGATGCTAGAGTATTTGAAGACGATTTCGATCCAATTACTAGCAAGCTGGACAGAGAAGCAGATGTTGATGCATCAAGTTCTTTACCTATGAATGAAAAAGAGAATAGTACAAGGGAAAATAATGTAGCCAAGATTAAAGTCGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTTGCTAAAAAGGAGGATGATATTGTAACTGTATCTGATAATGCATATTTGACTCTCCATGAGCCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTCTTGATGAGCATGTTACCAATGATGAAGTATACCGAGCTACAGTGGAACCAATTATTCCTACAATTTTTGAGCGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCCGCAGAAGATCTTGTCCGACAGTTGCATCGACCAGTTTACCAGAATCAGAAATTTAAATTGTGGCTCAGTTACTTTGAGATATATGGTGGAAAACTATTTGATCTTCTTAGTGACAGAAAGAAACTTTGCATGAGGGAAGATGGCCGACAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTTTGATGTACAAATTGTTAAAGAATTCATTGAAAAGGGAAATGCTGCAAGAAGTACAGGATCCACTGGTGCTAATGAGGAGTCTTCCAGGTCGCATGCTATCTTACAACTGGTGGTAAAGAAGCACCCTGAGGTGAAAGAGAGCAAGCGGAACAACAACAACGATGGAAATGAGGCAAGAAGTGGAAAGGTTGTGGGAAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACGACTGATAATGATCGTCAGACACGGATTGAAGGAGCAGAAATCAACAAAAGTCTTTTGGCTTTGAAGGAATGCATTCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGAGGAAGCAAACTTACAGAAGTACTCCGTGACTCCTTTGTGGGCAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCTGGGTCTTGTGAACACACACTCAACACCTTGAGATATGCAGATAGGGTTAAAAGTCTATCCAAAAGTGGAAATTCGAGAAAAGACCAGGTTCCAAATTCTGTACCACAAGCTAATAAGGAGGTTTCTTCCACATCATCTCTTCCATCTAGTGCTGGTGCAGAGGATTTTAACGACCAGCGTCAAGAGAAGACAATGGATATGGGCAGGAAATTTGTTGAAAGAGAAAGTTCTTTGTACAACTCTGCTACTGATGTTGACAAACAGCCATCAAGTGTTTCTTCAAGTTACCTACTAAACGGGCGAGAAGAAAAAGGTCTGACTTCTGCTTCAATGGACAGGGAGAGGTTTGAAGTGAAGAACTCGTTCAACGATTATACCAGTCAAAAAATGACCTCTTATTCACAAAATGATACAGTTGAGAAAGTGCAAAAGGTGTCCCCCCCACGCAGAAAAGGAGCTAAGGAGGAAAAGTCTGAAAGACCTGCAAACTTGACGAAAAGGGATGCCAATGGTTCTGATCTCTTCACGACAAGCTCCAAGCAGCAGACCATGGGGAATTATAGCACTGTTACCACAGGGAATTATAGCACTGTTACCACTGGATCCAGGCTTTATGAAGCAGAATCCTCTCCTGATGGGAATATCAGTGCAGTACTGGAGGAGGAAGAAGCATTAATTGCTGCTCATAGAAAAGAAATAGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCCGAAGTGGACCAACCGGGAAGCCGGATTGACAACTATGTAACCCAATTGAGCTTTGTGCTATCTCGCAAAGCAGCTAGTCTCGTGGGTCTCCAAGCTCGCCTCGCAAGATTCCAACATCGACTGAAAGAACAGGAGATTCTAAGCAGGAAACGAGTTCCCCGTCAATAA 2427 0.4417 MPQANAAALYDHAAASDAGDAVMARWLQSAGLQHLASPIASSGIDQRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYTPTTQTLGGVAGSDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGDARVFEDDFDPITSKLDREADVDASSSLPMNEKENSTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVSDNAYLTLHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYRATVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPVYQNQKFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVFDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKKHPEVKESKRNNNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNSRKDQVPNSVPQANKEVSSTSSLPSSAGAEDFNDQRQEKTMDMGRKFVERESSLYNSATDVDKQPSSVSSSYLLNGREEKGLTSASMDRERFEVKNSFNDYTSQKMTSYSQNDTVEKVQKVSPPRRKGAKEEKSERPANLTKRDANGSDLFTTSSKQQTMGNYSTVTTGNYSTVTTGSRLYEAESSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2231 808 MobiDBLite consensus disorder prediction 632 693 - -
Lja6g2231 808 PANTHER KINESIN-LIKE PROTEIN 659 807 - -
Lja6g2231 808 ProSitePatterns Kinesin motor domain signature. 423 434 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja6g2231 808 ProSiteProfiles Kinesin motor domain profile. 188 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g2231 808 Coils Coil 780 800 - -
Lja6g2231 808 SMART kinesin_4 186 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g2231 808 Gene3D Kinesin motor domain 164 527 IPR036961 -
Lja6g2231 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 524 IPR027417 -
Lja6g2231 808 MobiDBLite consensus disorder prediction 584 617 - -
Lja6g2231 808 MobiDBLite consensus disorder prediction 674 693 - -
Lja6g2231 808 MobiDBLite consensus disorder prediction 648 671 - -
Lja6g2231 808 PANTHER KINESIN-LIKE PROTEIN 4 662 - -
Lja6g2231 808 MobiDBLite consensus disorder prediction 524 565 - -
Lja6g2231 808 PANTHER KINESIN-RELATED PROTEIN 6 4 662 - -
Lja6g2231 808 PANTHER KINESIN-RELATED PROTEIN 6 659 807 - -
Lja6g2231 808 MobiDBLite consensus disorder prediction 524 560 - -
Lja6g2231 808 CDD KISc_KIF2_like 188 522 - -
Lja6g2231 808 MobiDBLite consensus disorder prediction 632 647 - -
Lja6g2231 808 Coils Coil 724 755 - -
Lja6g2231 808 MobiDBLite consensus disorder prediction 584 606 - -
Lja6g2231 808 Pfam Kinesin motor domain 194 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g2231 808 PRINTS Kinesin heavy chain signature 424 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g2231 808 PRINTS Kinesin heavy chain signature 269 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g2231 808 PRINTS Kinesin heavy chain signature 379 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g2231 808 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2231 Lja-Chr6 51245953 51253100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2231 180 524 Calmodulin-binding Proteins AT5G65930 33.613 1.25e-40 159