Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2225 ATGCTGATGGAGAATTCAGAGGGAGTGAAGCGGCATTTCGCTTTGGCAGCGGTGGGTGAGTTGCCTGATTCTCACCGTTCTTCTTCACCTGGGGTAGCTACCTTCACTGGCCACACTCTGAAGATTCAGCATGAACCTCACCAGGTTCTGCTCAACGTTGATCTTTCAGCTGTCAAGCTATTCAGGTTAGGTCCTGTTCAATTGGTGTGCATGGTGGAAGGGGCTGATGCTGGTAAACAGACATCGTATTCAAGGGGAGTCGCTATACAGTTTAAAAATGAGGAAGAGTGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGGGGAAACTTACCAAATGGAACTGATATTGTAACGACTAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTCCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTACTATACTGCTGTTATTGAGAATCACAGTGATTTCTTTGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGCGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAGCATGTTTACGCCGTTGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGTAACCCAGAACTAGGTCAACGAATTACCGTTATTAAAGGCAGAGTTGAGGATGTGGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCATCCCTAATGGGAAAATGTTTCCTTCAGTGGGAAGGATTCACATGGCACCTTTCAGCGATGAATATTTGTTTGTTGAAATGGCTAATAAGGCCCTGTTCTGGCAGCAACAAAACTATTATGGTGTTGACTTGACGCCCTTGCACAAGACTGCATTTCAAGGATATTTTTCTCAGCCAGTAGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTCCTTCCATGCTCCATGTCCTAGACTTTACCAAAATAAAGGAAGAAGAGTTGTATGAGATTGATATTCCTCTCAGATTTATAGCCACTGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTGCTGTTTAATGGAAGTACTGTGCGAAGGTGGCTTACCACTGCCCCTGGTGCACCGGTAACTCATTGGTATCAGTTGCGTTGTGTTCTCGAGCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTGCACTTGATTGCCCACAATGCACAGAGTTATACAATCTATTTAACTTTGTCAGCTAAAATGTGGGGGCCTGGCGCTGGACAAGGAGGGATTCTTCAAACATCATCCTGTAAGCTTGACCTGAAAGAACCGTACTATAGAATGTCTCAACCCCAAGCTTATGCAGTAAACCAAGATCAGCAACCTCAACCATTTATACAGACACAGGATGTGCACATTAAATCTCAGGATTTGGATGAAACTGAGATGATGCAACAGCCTTCCCCCAATTCATGTGCTCAGATTGACTCGCTCATGCAGAATTTATAA 1608 0.4347 MLMENSEGVKRHFALAAVGELPDSHRSSSPGVATFTGHTLKIQHEPHQVLLNVDLSAVKLFRLGPVQLVCMVEGADAGKQTSYSRGVAIQFKNEEECEAFHCVFQQWKKEFNVQGGNLPNGTDIVTTKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYTAVIENHSDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPELGQRITVIKGRVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLIPNGKMFPSVGRIHMAPFSDEYLFVEMANKALFWQQQNYYGVDLTPLHKTAFQGYFSQPVVDAFDPRLLIAPSMLHVLDFTKIKEEELYEIDIPLRFIATVGARVHGLACWFDVLFNGSTVRRWLTTAPGAPVTHWYQLRCVLEQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAGQGGILQTSSCKLDLKEPYYRMSQPQAYAVNQDQQPQPFIQTQDVHIKSQDLDETEMMQQPSPNSCAQIDSLMQNL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2225 535 CDD AdoMet_MTases 182 282 - -
Lja6g2225 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Lja6g2225 535 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 9 491 - -
Lja6g2225 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 456 IPR029063 -
Lja6g2225 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 180 251 - -
Lja6g2225 535 Gene3D - 285 493 - -
Lja6g2225 535 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Lja6g2225 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 9 491 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2225 Lja-Chr6 51171034 51177851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2225 143 432 C2H2 Transcription Factor Family AT3G12270 33.333 8.47e-40 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2225 6 51171034 51177851 Lja6g2225 6 51171034 51177851 ECH
Lja4g1283 4 11429786 11437607 Lja6g2225 6 51171034 51177851 PCT