Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2163 ATGAATGATTCTTCAGGAGATAACTGGCTTAATCTGTTTGATGACGAGCTTTATATCATCGATGAGGATGATAGTCTGAATTCTAGCCCTGCCAACGGTTTGAAGCAGGGTGTGAATGAAGGGGATAATGATGGGGGAAATTTTGTGGATGTCGATGAGATGTTTGAAACTGGAAATGACAGTCAAAAAAACTCTGATGTAGAAGTTAAAGTCATGAAAAGGATTACTGAATTGTCTGCAGACGACATTAGAGGGATGGATTTCTCTTCTGAGGAGGAAGCATGTGAATTCTATTCTAAATATGCTCGTATCCGTGGATTCTCTCCAAGAAAAGATGATGTATACAAGGATGATGATGGCAAGATTATCTCACGACAGGTGGTGTGCAATAGGGCTGGACAAAGGCATCAGAAGCATATGCATAATAGTGGCAGAAGAAAACAACCTAAGCCTATTACTAGAGTGGGTTGCCTTGCTAGAATTCGATTTCGTTGTTTTTCTAGCAGTAAAAGGTGGAAAGTGGTTTTTTTTTGCGATGAACACAATCACCCATTAACACCATATAAGCATGTTCATTTGATTCCAAAATTTCGGCAATTGAGTGAAGGGGACAAAGCTCAAGCAGAAGCTGGGATGAGAAGTGAGTATATTGATGAATTTCCAAGCAATCTAGTTTCTAAGAGGTGGTTGAAAACAGCCAAGTCTGCTCATGTGTATTCAATTTCAGAGCCTAGTATTCATTCACAGAATATGAAATTGTTGCGAAAAGGAGCTATGTCTGCCGCATGCAACTATCTCGCAGAAATAGCATGCGAAAAGGATGATGATTTTTCAAGTGTAATGGAAGACATTTATAAGCTGTTGAGGGATGTTCAGAAGAGTCGCAAACCGGGTTGTACAACAAAGAGTGCAGCCTTTAATGTGGGTGATCCAACTGTTGTACAGGGTAGAGGTGCCCCCAAGAAGACCAGAACTGTCACCAAGAGAAGGCATTGCTCAAATTGCAGGGGTATTGGACACACGATTCGTACGTGCCCGGTTTTGCTTTATCCTGATCAAGTCAATAACAGTGAAACAGGTGAATCTGCAAGTGAAGGAATTGAGGACAGCACAGACGACGAGACAAACGTTGGCAGCGTAGATCGGCAGAATAAGGGGGCTTCGGTGGCAAGTAAACTTAAATCGCAGCAACGGAAGAAGGGAAATGACTCCTCATCCACCCAAAACAAGCGTTCAAATCAGAACACGGTGTCGACAAAACAAAATAAGCGTAAATCTAAGCAGCGAGAAGTCCCAGTCATGATTCATTCAAGCCAAGTATCTGTGAATGAAGTGACTCAGAGTTCACCGAATAATGTAGGTCGCGGTGATGTGGATAACAACAGAGTTACTTTGTTGCCCCAGCATCCACAGGAAATACCTTTGACCCAAGAATCTGTGAATCAGGTACATGTTTATAACATGGAGCCTATTGTACAACAAGTCCACTATCCTGTTGTTCGTGCTTCAGCTGGACTTCCATTTTTGCAACCTACTTATGCCGTGAATATGACTAATGGAGTTCAGGTGTTTCCACAGTTTATACAGCACCAAAACGTCCAGGTTCCTTACCAAGGAGTTCAGATGCAAACTCTATTTCAAGCTGGACCTTCTGGCTTACTCCCGACATTTTCATCGACGTTGGCGGCAGTCGATAGGAGACACAATAGAAATTCAAGTTTAGGAAATAATTGA 1734 0.4216 MNDSSGDNWLNLFDDELYIIDEDDSLNSSPANGLKQGVNEGDNDGGNFVDVDEMFETGNDSQKNSDVEVKVMKRITELSADDIRGMDFSSEEEACEFYSKYARIRGFSPRKDDVYKDDDGKIISRQVVCNRAGQRHQKHMHNSGRRKQPKPITRVGCLARIRFRCFSSSKRWKVVFFCDEHNHPLTPYKHVHLIPKFRQLSEGDKAQAEAGMRSEYIDEFPSNLVSKRWLKTAKSAHVYSISEPSIHSQNMKLLRKGAMSAACNYLAEIACEKDDDFSSVMEDIYKLLRDVQKSRKPGCTTKSAAFNVGDPTVVQGRGAPKKTRTVTKRRHCSNCRGIGHTIRTCPVLLYPDQVNNSETGESASEGIEDSTDDETNVGSVDRQNKGASVASKLKSQQRKKGNDSSSTQNKRSNQNTVSTKQNKRKSKQREVPVMIHSSQVSVNEVTQSSPNNVGRGDVDNNRVTLLPQHPQEIPLTQESVNQVHVYNMEPIVQQVHYPVVRASAGLPFLQPTYAVNMTNGVQVFPQFIQHQNVQVPYQGVQMQTLFQAGPSGLLPTFSSTLAAVDRRHNRNSSLGNN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2163 577 MobiDBLite consensus disorder prediction 432 457 - -
Lja6g2163 577 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 60 250 - -
Lja6g2163 577 MobiDBLite consensus disorder prediction 356 457 - -
Lja6g2163 577 Pfam FAR1 DNA-binding domain 96 186 IPR004330 -
Lja6g2163 577 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 60 250 - -
Lja6g2163 577 MobiDBLite consensus disorder prediction 380 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2163 Lja-Chr6 50693454 50696779 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja6g2163 FAR1 3.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2163 - - lja:Lj3g3v0948310.1 281.567