Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2154 ATGGTTAGAGACATGATGGGAACATACTCATCATCAGGAAATTCAAGAAGAGGTTATGGTGGTGGGGGAGAGGGAGACATAGAAGACATGAATATGAATATGAATATGAATATTGATGATGAGAAACCTGCATGGCTAGAGAGGCTGATGGCTGAGACATTCTTTGGTGCTTGTGGGGTCCACCACAACCGCAGGAAGAACGAGAAGAACATCTTTTGCTTACACTGTTGCCTCAGCATCTGCCCTCACTGCCTCCCTTCTCACCGCTCTCACCCTCTCCTCCAGGTGCGAAGGTATGTTTACCACGATGTGATTCGATTGGATGATCTCGAAAAGCTTATTGATTGCTCAAATATTCAGCCGTATACTATTAACAGTGCGAAAGTGATATTCGTAAATCAAAGGCCACAGTCAAGGTCATGCAAAGGTAGCCCCAATGCTTGCTTCACTTGTGATAGGATTCTTCAGGACCCATTTCATTTCTGTTCTCTTTCATGCAAGGTGGATTACATGGTGTCCGTGGGACAAAGCTTGGCCAGCATTTTACATCGATTTGATGAATCTGACTTTACAATTTCGCAGTTCGAGGGTCTTCGAGTCGATGGCTCAGAGGTAATTGATGAAGATACCCACTTTGCCCCTAGTTGCTCTTATTCCAACAACGAAGCCACAAGCAATTCGGTAATTTCACGAGAACCCCACAAGAAGGGCAAGGCCAATAGGTTCCTCCCTGGGATCGTCCTCTCTCTTGGCAGCAGAAGAAAAGGTGCACCTCATAGGGCCCCTCTCTCCTAA 795 0.4604 MVRDMMGTYSSSGNSRRGYGGGGEGDIEDMNMNMNMNIDDEKPAWLERLMAETFFGACGVHHNRRKNEKNIFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFVNQRPQSRSCKGSPNACFTCDRILQDPFHFCSLSCKVDYMVSVGQSLASILHRFDESDFTISQFEGLRVDGSEVIDEDTHFAPSCSYSNNEATSNSVISREPHKKGKANRFLPGIVLSLGSRRKGAPHRAPLS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2154 264 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 43 264 - -
Lja6g2154 264 PANTHER - 43 264 - -
Lja6g2154 264 Pfam PLATZ transcription factor 97 168 IPR006734 -
Lja6g2154 264 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2154 Lja-Chr6 50540540 50559568 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja6g2154 PLATZ 2.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2154 - - gmx:100806234 441.425