Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2137 ATGCTAGCTACTAGCTCCAACTTGTTTTTATTTTCTACAATTTATTTTTTGCTGCCAGTGCAGATATGTGTCATAGTTTGTGTGTGCCGGAAAAGAAGACAGAGTGATGGTGGATCAGTTAGTCCTGTCTCACAATTTCTTACACTCGCTATGGATAAATTTCTCAATGACATGGAAAGGGAGAAGCCGATCAGGTTTACAGGTCTACAGCTGATGAGCGCAACTGATAAATACGCCAACTTGTTGGGTTCAGGAGGTTTTGGAGCAGTTTACAAGGGTGTTTTTAGCAATGGGATCACGGTAGCTGTGAAGGTTTTACGTGGGAGTTCAGAAGACAAGAATGTTGAGGAGCAGTTCATGGCAGAAGTGGGTACAATTGGTCGAGTTCATCATTTCAACCTTGTTCGGCTATATGGATTTTGCTTTGAAAGAAACTTGATAGCACTGGTTTATGAGTACATGGAAAATGGCTCTCTTGACAGGTTTCTGTTTCAGGAAAATACGATCTTAGGATATGAAAAGCTTCATGAGATTGCAGTTGGGACAGCAAGAGGAATTGCTTACTTGCATGAAGAGTGCCAGCAAAGGATAATCCACTATGACATAAAGCCAGCAAACATTCTCTTGGACAAGAACTTCAATCCTAAAATTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAAGGAAAATACTCACATAACCATGACTGGTGGGAGGGGTACTCCTGGTTATGCTGCACCTGAGCTTTGGGTGCCATTTTCTGTAACTCACAAGTGTGATGTTTATAGTACGAGAAGAAACATTGATGTGAACCTTTGTGAAAGGCAGGAGTGGTTTCCAATGTGGGCTTGGAAAAAATTTGATGCTGGACAAGTGGGGGAGTTAATGATTGTGTGTGGGATAGAGGAGAAAAATAAGGAGATAGCAGAAAGAATGGTTAAGGTAGCTCTGTTGTGTGTTCAATATAGGCCAGAAGCAAGGCCTATAATGAGCGTTGTGGTCAAAATGTTGGAAGGTTCAGATGAAATTCCAAATCCTTTGAACCCATTTCTGCCCTTTATGGATGGAACTTTGGCTGCTCATTCAGTCCAAGTGTCACAGACTTATACAACAACTATGTCTTCAGAGTCTTTGGTAAGTGACACCAGCATCCTCTGTGCTACTCCTGTTATGAAGAAGTATGAGGTTTAA 1191 0.4156 MLATSSNLFLFSTIYFLLPVQICVIVCVCRKRRQSDGGSVSPVSQFLTLAMDKFLNDMEREKPIRFTGLQLMSATDKYANLLGSGGFGAVYKGVFSNGITVAVKVLRGSSEDKNVEEQFMAEVGTIGRVHHFNLVRLYGFCFERNLIALVYEYMENGSLDRFLFQENTILGYEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPANILLDKNFNPKIADFGLAKLCNKENTHITMTGGRGTPGYAAPELWVPFSVTHKCDVYSTRRNIDVNLCERQEWFPMWAWKKFDAGQVGELMIVCGIEEKNKEIAERMVKVALLCVQYRPEARPIMSVVVKMLEGSDEIPNPLNPFLPFMDGTLAAHSVQVSQTYTTTMSSESLVSDTSILCATPVMKKYEV* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2137 396 SUPERFAMILY Protein kinase-like (PK-like) 61 338 IPR011009 -
Lja6g2137 396 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 394 IPR045874 GO:0004672
Lja6g2137 396 PANTHER PUTATIVE-RELATED 20 394 - -
Lja6g2137 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lja6g2137 396 ProSiteProfiles Protein kinase domain profile. 76 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2137 396 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Lja6g2137 396 Gene3D Transferase(Phosphotransferase) domain 1 154 345 - -
Lja6g2137 396 Pfam Protein kinase domain 80 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2137 396 SMART serkin_6 76 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2137 396 Gene3D Phosphorylase Kinase; domain 1 51 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2137 Lja-Chr6 50277690 50279469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2137 65 347 Receptor kinase-like Gene Family AT5G38280 41.776 1.05e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lja6g2137 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2137 - - gmx:100803355 592.808