Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2129 ATGGAGGGTCAACCAGCCAAACGTAGACGCGTTTACTCAGTTGAACCAAACAAAGTAGTAGAAGCAGCATTTGCTAGAAACTACATGAACTATTTAGTTCCAGCTTTGATGAAGATCAAGGAAATTAATACTTGTGGTGGTGATATTCAGAATGTTGTCAAGCATGAAGTGGACATGGCAATGGTGTCCTCAGCCCAAGGCTTTGCATGGAGTAATTCTCTCAAACTCAAGCTTCAAAATCAAAGGGAGGATATTGGAGTCAGTGTAAATGGAAACACTAGTATCCCTCAAAGCCCTAGTTCAGAGTCACAGGCTAAGATTTTGGTGAGTAAGTCTAAGAACAATGACATGCCAACAATGAAAAGGGATTTAATTGATGTTGAAGATGATGATGAGGTCATTAATGGGCAGTTGAAAAGCTTAAAAAGGTTGATACCTGGAGGAGAAAATATGTGTAATGATGAAATGGTGGTAGAACTAGAGAGCTACATAGGTTGTTTGCAAATGCAGTATGTTAATTTATGTTCAATGTGTTGTACTATATATCGTTTTCAATATAGTTTTTTATTGGAAAATGTTTGGTGA 585 0.3744 MEGQPAKRRRVYSVEPNKVVEAAFARNYMNYLVPALMKIKEINTCGGDIQNVVKHEVDMAMVSSAQGFAWSNSLKLKLQNQREDIGVSVNGNTSIPQSPSSESQAKILVSKSKNNDMPTMKRDLIDVEDDDEVINGQLKSLKRLIPGGENMCNDEMVVELESYIGCLQMQYVNLCSMCCTIYRFQYSFLLENVW* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2129 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 178 IPR044660 GO:0006355
Lja6g2129 194 PANTHER TRANSCRIPTION FACTOR BHLH146 3 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2129 Lja-Chr6 50212857 50213550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2129 7 178 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 34.884 1.88e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2129 - - lja:Lj6g3v1358590.1 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1649 4 15492508 15493169 Lja6g2129 6 50212857 50213550 PCT