Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2103 ATGGGGTTGTTGTTGATGGAGTTTGGATGTGTATTTATCATTCTGTTTGCACTTGTGCAATCTGGGAAGGGAGAGGTGTACATAGTAACAGTTGAAGGTGAGCCTATCATAAGTTATATGGGCGGCATCGATGGTTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATTGATACCTCAAGGGAATCCGTCACTTCTTATGCCCGCCACCTTGAAAATAGACATGATATGCTTCTGGGGATGCTTTTTGATGAAGGGACATACAAGAAACTCTATAGCTATAGACATCTTATAAATGGGTTTGCTGCTCATATTTCCCCAGAACAGGCAGAAACTCTTAGACATGCTCCTGGTGTAAAATCTGTAACGAGGGACTGGAAAGTTAGGAGACTCACAACACATACCCCACAGTTTTTAGGGCTTCCAACTGGTGTATGGCCAACAGGAGGTGGCTATGAACGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATCTTTCCTCACCACCCAAGCTTTAGAACTCATAATACTGAACCATATGGGCCGGTTCCGAAATATAGAGGAAAATGTGAAGTTGACCCTGACACTAAGAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCCCTAGCTGCAAAAGCTGCGGGAGCATTCAACCCTTCAATTGATTTTGAGTCTCCTCTAGATGGGGACGGCCATGGAACTCATACGGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGCGGAATGGCTCCCTGTGCTAGGATTGCTGTGTACAAAGCACTCTATAGACTGTTTGGAGGGTTTATTGCAGATGTAGTTGCAGCAATTGATCAGGCTGTACATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCAAACAGTCCTTCAACAACAACCAAAACAACGTTTTTGAATCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACATTAGTTTCATACAGTCCATGGATAGCATCTGTAGGAGCTGCAATTGATGATCGTAGATACAAAAACCATCTAACCCTTGGAAATGGACACATCTTAGCAGGACTTGGGCTGTCACCTTCTACACGTTTAAACAAAACATACACGTTGGTTGCTGCAAATGATGTTCTGCTAGATTCCTCAGTTATGAAGTTCAGTCCCACGGATTGCCAGAGACCAGAAGTTTTAAACAAGAACTTGATAAAGGGGAATATTCTTCTCTGTGGCTATTCATACAACTTTGTTTCTGGTACTGCATCAATAAAAAAAGTCTCTGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTTTGTGTAGAAAATGTTTCTCCTGGAATGAAATTTGATCCAGTCCCTGTTGGCCTTCCTGGGATTGTTATCACAGATGCCAGTAAGTCAAAGGACTTGATAAATTATTATAATATCTCCACACCAAGAGATTGGACTGGAAGGGTGAAGAGTTTCAAAGGTACAGGTAAAATCGGGGACGGCTTGATGCCTATTCTCCATACATCTGCGCCTCAGGTGGCGTTATTCTCTGCCAGAGGGCCAAATATAAAGGACTTTAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGCTGCTTGGTCTCTAAACGGAACTGACGAGCCAAATTATGATGGAGAGGGATTTGCCATGATCTCTGGGACTAGCATGGCTGCACCGCATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCCGCCATTAAATCGGCCTTGATGACAACATCAACAACTATAGACAGAGCAGGAAATCCTATTCTAGCACAGCAATATTCTGAAACAGAAGCTGTGAAGCTGGTCAGAGCCACTCCTTTTGATTATGGGAGCGGACACGTGAGTCCAAGAGCTGCCTTGAACCCTGGTCTCATCTTTGATGCAGGATACGAGGATTATTTAGGATTTTTGTGCACAACACCTGGCATTGATGTTCACGAGATAAAGAACTACACAAACTCACAATGCAACAATACAATGGGCCACCCATCAAATTTAAACTCTCCATCCATTACAGTTGCCCATCTTGTAAGAACTCGGATTGTGACCCGCACAGTCACAAATGTTGCAGAGGAAGAAACCTATGTGATCCAAGCCAGAATGCAACCAGCAATTGCAATTGAAGTCAACCCTCCAGCAATGACCATTAAAGCAGGAGCATCGCGTAAGTTTACTGTAACACTTACTGTTCGCTCAGTGACAGGAACTTATAGTTTTGGAGAGGTTATGATGAAAGGAAGCAGAGGGCACAAAGTGAGGATCCCTGTTCTGGCTAATGGTTACTCAAGATAG 2460 0.4374 MGLLLMEFGCVFIILFALVQSGKGEVYIVTVEGEPIISYMGGIDGFEATAVESDEKIDTSRESVTSYARHLENRHDMLLGMLFDEGTYKKLYSYRHLINGFAAHISPEQAETLRHAPGVKSVTRDWKVRRLTTHTPQFLGLPTGVWPTGGGYERAGEDIVIGFVDSGIFPHHPSFRTHNTEPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFALAAKAAGAFNPSIDFESPLDGDGHGTHTASIAAGRNGIPVRMHGHEFGKASGMAPCARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPSTTTKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVGAAIDDRRYKNHLTLGNGHILAGLGLSPSTRLNKTYTLVAANDVLLDSSVMKFSPTDCQRPEVLNKNLIKGNILLCGYSYNFVSGTASIKKVSETAKALGAVGFVLCVENVSPGMKFDPVPVGLPGIVITDASKSKDLINYYNISTPRDWTGRVKSFKGTGKIGDGLMPILHTSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWSLNGTDEPNYDGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTIDRAGNPILAQQYSETEAVKLVRATPFDYGSGHVSPRAALNPGLIFDAGYEDYLGFLCTTPGIDVHEIKNYTNSQCNNTMGHPSNLNSPSITVAHLVRTRIVTRTVTNVAEEETYVIQARMQPAIAIEVNPPAMTIKAGASRKFTVTLTVRSVTGTYSFGEVMMKGSRGHKVRIPVLANGYSR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2103 819 CDD Peptidases_S8_3 132 635 IPR034197 -
Lja6g2103 819 Gene3D Peptidase S8/S53 domain 158 689 IPR036852 GO:0004252|GO:0006508
Lja6g2103 819 Gene3D - 371 536 - -
Lja6g2103 819 Pfam Peptidase inhibitor I9 26 129 IPR010259 -
Lja6g2103 819 ProSiteProfiles Serine proteases, subtilase domain profile. 125 676 - -
Lja6g2103 819 PANTHER CUCUMISIN-RELATED 16 818 - -
Lja6g2103 819 SUPERFAMILY Protease propeptides/inhibitors 68 129 - -
Lja6g2103 819 Gene3D - 693 816 - -
Lja6g2103 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 130 IPR037045 -
Lja6g2103 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 818 IPR045051 -
Lja6g2103 819 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Lja6g2103 819 SUPERFAMILY Subtilisin-like 131 680 IPR036852 GO:0004252|GO:0006508
Lja6g2103 819 CDD PA_subtilisin_like 378 516 - -
Lja6g2103 819 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Lja6g2103 819 PRINTS Subtilisin serine protease family (S8) signature 598 614 IPR015500 -
Lja6g2103 819 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Lja6g2103 819 Pfam Subtilase family 156 637 IPR000209 GO:0006508|GO:0008236
Lja6g2103 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 599 609 IPR023828 -
Lja6g2103 819 Pfam Fibronectin type-III domain 721 813 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2103 Lja-Chr6 49625365 49632610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2103 6 819 Subtilisin-like Serine Gene Family AT4G30020 80.025 0.0 1352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2103 - - gmx:100784999 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2103 6 49625365 49632610 Lja6g2103 6 49625365 49632610 ECH
Lja4g1626 4 15222775 15228914 Lja6g2103 6 49625365 49632610 PCT