Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2062 ATGAAGATGGGGATGGTGGTTTTGGCACTGATTCTGCAGCTGGTGAAGCTCTCTATCATTGGTTTTGCTGTGGCAGCTCAAGGACCTGAAGGGTCTCTTATATCCCCATCTCCAGCATTCTTTCCTGTCATTCATCCCAGAGGACCAGGTCCTATCCATCATGGACAGTCATGGGGAAAAAGTGCTTCAAGCCCTTCAGAATCAGATGGGTTTGTTACATTCCCATCTCCAGCAACCTTACCTGTGGATCCTGCCCCCAGTGAAGCACCTGGTCTTTCACAACCAAGAAATCCAGGGAGAACCATGGCCCCAAGCTCTCCAGATGTACCAAATGGGTCATTCTTGCACCCTCCAGTTACATCACCACCTCCTACATCAGCTCCATCTCCTCGGAAGATTAAAGGAATTGAACCTTCCATATCTCATAGTCCTAGTCCAAGCACCATAGCATTAGCACCATCACATAAGGTATTTCCTTCACCGCCTACCGCTGAAAGGAATGTGCCACCATCCATACAACTAAGTCCACCTCAAAGGATAGCACCTGCTGTGAGGCCTCCTGAATCCACACCAATTGCTCCAGGTCCTTTTCCAATACCTTCTGGCAATTTCCCAAAAGTTTCACCGGCCAGCCAACCGATTGAACATGGAAGTTTGCCTCCTAAAGTTGATACAAGGAATGAAAATAAGTCTCACAACATAGAGCCAATTTCACCAGCTCCTTTTACAATACCCTCTCGCAATTTTCCGAAATTTTCACCGGCCAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAAGGTTGATACGAGGAATGAAAATAAGTCTCACAATGTAGAGCCAATTTCACCAGCTCCAGTTGCAACACCTTCTGCCAATTTGCCCAAAATTTCACCAGTAAACCATCCAACTGAAAATGGAAGTTTGCCTCCTAATGCTCATAGAGAGGGTCCAAATAAAGGGCAAACGCCGGAGTCCATTTCACCAGCCCCTGTATTCAATATTCCCAAACATTCCCCGGTGAGTCAACCAACTAACCATGGAAGTTTTCCTCCAACTGTTCATAGAATGAATTCCAGTACAGGTCACACATTGGAGCCAGTTTCACAAGCTCCACTTGCAATACCTTCTGCAAATTTTCCAAAAAATTCACCAGTCAGTCAGCCAACTATTAATGGAAGTTTTCCCCCTGATGTTCATGATAGAACTGCAAATAAGGGACATACCCATACCCCAGAGCCAGTTATGCCATCTCCAGTTCAATCACCAACAAGCCCATTTCCAGTAGATCCTCCATTGGCCTACCCTGTCATACCAGTAGCATCTCCTTCCAAATTACCAGATCCTGTTATCTCTCGTGCATTAACTCCTTCTACAAGCTTCAACTGGAAAAAAGGTGGAGAACCAGTTTCTGCCCCTTTGTACAAAACACCGAAGCCACTACCAGCTGCACATTCCCCTGCGCATGCTCCTACTGAACATAAAGCAAGGCAATTTCATCATGCTCCTAAGCCACTTACCTCATCTCCTAAATCTCCTCCCAATGAAGAAGATCATTCTCCCTCTTCACCTTCGACCACATATTATAAGCATCACCATTCAAGGAAGACAATCATCAGCCCAGCTCCTGCATCATCATATTTGGTTTCTCCTCCCGTTTCAAAACACCAAGGTCAACCAACTCCTCCCTTATCACCGCCAAAAAGTGGACGAAGGCATCACGCTCCCCCACCAATGGACACAGGTTCTTCAGTTTCTCCATTCAACTTCCCTATTCAATCACCACGGAGCCAGGTTTCACCAGCTCCTTCTCCATCATTCAAAATATTCCCCCATCCAACCAAAAGTAAGAAAGTTCCATTTCATCCTCCAAAAGTCTCTCCTTCTCGGCCTTCTTCCAAGAACAATAAGAAGCCAATTCCTCAAGTTCAAGCGTTGCCACCCCCACCTCCCAATGAAGATTGTTTATCAACCGTTTGCTCAGAACCCTATGTAAACTCTCCACCTGGAGCACCATGCAGATGTGTCTGGCCCATGAAAGTCGGCCTTCGCCTTAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGGGTTTTCATGACGCAAAGTCAAGTTCGCATTATGGGAGCCAATGAAGCAACCCAGCAACCAGATAAAACTGATGCCCTTATTGATTTGGTACCACTCGGGGAAGAGTTTGATAACACTACCGCGTTTTTAACTTCTGATAGATTTTGGCATAAAAAGGTTGCAATAAAAGCTTCTAACTTTGGGGATTATAAAGTGTTATATGTGAGCTATCCAGGTTTACCTCCGTCTCCTCCTTTGCCACCTTCAAGCATTAACATGATAGATGGTGGTCCATATTCAATTGATGGCAATAATGGTAGGACAATTAAGCCCCTCGGGGTTGACATACCGAAGAGGCAGCAAAAAGGTGGACTTAGCAAGGGCGTGATAGCTATTATTGCTCTCTCAGTTTTTCTAGCAGTTGTTTTATGCTCTGCTGCTGCTTTGGCCGTTTTCAAGTGCAGAGAGCATGTGAGTCAATCAACATTGACACCACCGGTTTTGCCTTCGTCTCTTACTAAAACACCAGGTACCGCCAGGTCAATAGTTGGAGGTGTGCCTGCTTCAGCTTCATCATCTTCATTTCGATCTAGCATTGCTGCTTATACAGGATCTGCTAAAACTTTCAGTTTGAAGGAGATAGAGAAAGCCACTGATAATTTTCATGCTTCCAGAATACTAGGAGAAGGTGGTTTTGGGCTAGTTTATGGTGGGAACCTTGAAGATGGTACAAAAGTAGCAGTCAAGGTTCTCAAAAGGGAAGACCATCATGGTGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTGAAGTTGATTGGTATATGCTCAGAGCTCAGCTCCCGCTGCCTGGTTTATGAACTCGTTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGATGACAGGGAAAGAAGCGCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGAGGTCTGGCTTACCTGCATGAAGATTCAAGTCCTCATGTCATACATAGGGACTTCAAGTCAAGCAATATCTTGCTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCACGGACAGCAGCTGATGGGGAGAACAGACATATATCCACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCGGAGTACGCAATGACTGGGCATCTTCTTGTGAAGAGCGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAATAGACATGTCACAACCCCCTGGTCAAGAGAATCTCGTCGCATGGGCTCGTCCACTCCTCACAAGTAAAGAAGGATTAGAAGCATTAATTGATCCATCTCTAGGAACTGATGTGCCATTTGATAGTGTGGCAAAAGTTGCAGCCATTGCTTCGATGTGTGTACAACCAGAGGTATCAGACCGTCCATTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAAGAGGTTCTAGCCGGGAGGATTTATCTGTTGATTCGATTACTCATCTAGATAATTTCCAAGGCCATTTCTCAGACACCTACCATGATTCCGAAGTTGATATTGAAAGAGGGTTGTCAGCATCAGACTTATTCAGCTCATCAGCAAGATTACGAAGGCAGGCATCTGGATCATTTAGAATGCATTCTTATTCAGGTCCTCTCAGAACTGGAAGAAGCCAGCGGTTGTGGCAGATAATTCGAAAGCTTTCTGGTGGTAGTGTCAGTGAACATGGACCTATGTTCAAGTCATGA 3915 0.4506 MKMGMVVLALILQLVKLSIIGFAVAAQGPEGSLISPSPAFFPVIHPRGPGPIHHGQSWGKSASSPSESDGFVTFPSPATLPVDPAPSEAPGLSQPRNPGRTMAPSSPDVPNGSFLHPPVTSPPPTSAPSPRKIKGIEPSISHSPSPSTIALAPSHKVFPSPPTAERNVPPSIQLSPPQRIAPAVRPPESTPIAPGPFPIPSGNFPKVSPASQPIEHGSLPPKVDTRNENKSHNIEPISPAPFTIPSRNFPKFSPASQPIEHGSLPPKVDTRNENKSHNVEPISPAPVATPSANLPKISPVNHPTENGSLPPNAHREGPNKGQTPESISPAPVFNIPKHSPVSQPTNHGSFPPTVHRMNSSTGHTLEPVSQAPLAIPSANFPKNSPVSQPTINGSFPPDVHDRTANKGHTHTPEPVMPSPVQSPTSPFPVDPPLAYPVIPVASPSKLPDPVISRALTPSTSFNWKKGGEPVSAPLYKTPKPLPAAHSPAHAPTEHKARQFHHAPKPLTSSPKSPPNEEDHSPSSPSTTYYKHHHSRKTIISPAPASSYLVSPPVSKHQGQPTPPLSPPKSGRRHHAPPPMDTGSSVSPFNFPIQSPRSQVSPAPSPSFKIFPHPTKSKKVPFHPPKVSPSRPSSKNNKKPIPQVQALPPPPPNEDCLSTVCSEPYVNSPPGAPCRCVWPMKVGLRLSVPLYTFFPLVSELASEIATGVFMTQSQVRIMGANEATQQPDKTDALIDLVPLGEEFDNTTAFLTSDRFWHKKVAIKASNFGDYKVLYVSYPGLPPSPPLPPSSINMIDGGPYSIDGNNGRTIKPLGVDIPKRQQKGGLSKGVIAIIALSVFLAVVLCSAAALAVFKCREHVSQSTLTPPVLPSSLTKTPGTARSIVGGVPASASSSSFRSSIAAYTGSAKTFSLKEIEKATDNFHASRILGEGGFGLVYGGNLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICSELSSRCLVYELVPNGSVESHLHGDDRERSALDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADGENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQPPGQENLVAWARPLLTSKEGLEALIDPSLGTDVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSRGSSREDLSVDSITHLDNFQGHFSDTYHDSEVDIERGLSASDLFSSSARLRRQASGSFRMHSYSGPLRTGRSQRLWQIIRKLSGGSVSEHGPMFKS* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2062 1304 MobiDBLite consensus disorder prediction 416 438 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 376 394 - -
Lja6g2062 1304 Gene3D Transferase(Phosphotransferase) domain 1 996 1215 - -
Lja6g2062 1304 CDD STKc_IRAK 926 1194 - -
Lja6g2062 1304 ProSitePatterns Protein kinases ATP-binding region signature. 926 948 IPR017441 GO:0005524
Lja6g2062 1304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1042 1054 IPR008271 GO:0004672|GO:0006468
Lja6g2062 1304 Gene3D Phosphorylase Kinase; domain 1 892 995 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 582 604 - -
Lja6g2062 1304 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 470 1303 - -
Lja6g2062 1304 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 10 76 - -
Lja6g2062 1304 ProSiteProfiles Protein kinase domain profile. 920 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g2062 1304 Pfam Protein tyrosine and serine/threonine kinase 922 1193 IPR001245 GO:0004672|GO:0006468
Lja6g2062 1304 MobiDBLite consensus disorder prediction 338 367 - -
Lja6g2062 1304 SUPERFAMILY Protein kinase-like (PK-like) 900 1193 IPR011009 -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 57 73 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 294 308 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 511 528 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 45 653 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 556 572 - -
Lja6g2062 1304 PANTHER OS01G0750732 PROTEIN 470 1303 - -
Lja6g2062 1304 PANTHER OS01G0750732 PROTEIN 10 76 - -
Lja6g2062 1304 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2062 Lja-Chr6 49082994 49093740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2062 281 1299 Receptor kinase-like Gene Family AT5G56890 51.326 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lja6g2062 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2062 - - gmx:100802309 1665.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2062 6 49082994 49093740 Lja6g2062 6 49082994 49093740 ECH