Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2040 ATGATAATGAATAGATCATGCAGTTCTAATGCATATTTTTGGCTTATGAGTTTCTTCATTTTGAGTGTGGCTGTAAGGTCCCAATTGTCCCCATATTTTTATGCAAAAACATGCCCTGATCTTTTTGGAATAGTGAGAAGAGAGGTCCAAAACGCTCTGAAAAATGAGATGCGAATGGGTGCTTCTTTGCTTCGGCTTCACTTCCATGATTGCTTTGTAAATGGTTGTGATGGTTCAATTCTACTGGATGGAGATGAAGATAGTGAGAAATTTGCTGCTCCTAACTTGAATTCTGCTAGAGGATTTGAAGTTATAGATAGAATCAAAAGTTCAGTGGAGAGTGCATGTAGTGGAGTTGTGTCCTGTGCTGATATATTAGCCATAGCTGCTAGAGACTCTGTTCAACTGAGTGGAGGTCCCTTTTGGTTTGTTCCGCAAGGACGGAGAGATGGATTAGTCTCAAACGGGACATTGGCAAATATTTCAATTCCCGCTCCAACTGACACATTAGATACCATCATTTCCAAGTTTAATAACGTTGGCCTTGATCACAAAGATGTTGTTACTTTATCAGGTTCACATACCATTGGGCGAGCAAGGTGTGCCTCATTTAGCAAAAGATTGTTCAATTTCTCCGAAACAGGAGCACCAGATGATACTATAGAAACTGACACACTTACTGAATTGCAAAACTTGTGCCCAGAAAGTGGAGATGGGAACATAACTAGTGTGCTAGACCAAGACTCAGCGGATCAATTTGATAACCACTACTTCAAGAACTTGCTCCATGGAAAGGGTCTCCTTGGCTCTGACCAGATTCTGTTTTCGAGTGAGGACGCCACCGCAACTACTAAACCTTTGGTCCAGTTTTATAGCGAAAATGAAAGGTTTTTTCTTATGGAGTTTGCCTATGCCATGGTCAAAATGGGGAACATAAACCCGCTAACTGGTTCTGAGGGAGAGATTCGAAAGAACTGCAGAGTCGTTAATTCTTAA 996 0.4116 MIMNRSCSSNAYFWLMSFFILSVAVRSQLSPYFYAKTCPDLFGIVRREVQNALKNEMRMGASLLRLHFHDCFVNGCDGSILLDGDEDSEKFAAPNLNSARGFEVIDRIKSSVESACSGVVSCADILAIAARDSVQLSGGPFWFVPQGRRDGLVSNGTLANISIPAPTDTLDTIISKFNNVGLDHKDVVTLSGSHTIGRARCASFSKRLFNFSETGAPDDTIETDTLTELQNLCPESGDGNITSVLDQDSADQFDNHYFKNLLHGKGLLGSDQILFSSEDATATTKPLVQFYSENERFFLMEFAYAMVKMGNINPLTGSEGEIRKNCRVVNS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2040 331 Gene3D - 33 330 - -
Lja6g2040 331 PANTHER PEROXIDASE 59 12 329 - -
Lja6g2040 331 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lja6g2040 331 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Lja6g2040 331 PANTHER PEROXIDASE 72-RELATED 12 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g2040 331 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
Lja6g2040 331 Gene3D Peroxidase, domain 2 164 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2040 Lja-Chr6 48878104 48880227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2040 15 331 Peroxidase AT5G19890 60.625 2.36e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2040 K00430 - gmx:100817622 468.388