Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2005 ATGCCTCCAACATCAACTATTCCAATTCCACGACCTGAATTCCACACCTTATTCTTCAATGGGTCTCCAATCCCTCACAAATTCCCCAGAATCGCAGCTTCATGGACCATGACATTGGATTCCAAATTTTCCCAAACGATGAACAGTAACAGTATGAAGAAGATGAAGAAGAAGGAAGAACTCCCAGTGCAGCAGCTTTCAACGCCACCAGTTTCAAAGGTGGAGACCTTGAGCTCAGACAATCTCCAATTTGACCGGTTGCAGCCATCGGATCATGAATTGGTTCGAGAAAATAGGTTTGAGTTTGGCCAATTTGTTGCTAGAGAAGCTGTGCTTGATGAAGAATATTGGACAGCAGCATGGTTAAGGGCAGAAAGTCACTGGGAGAATAGAACATATGACAGATATATTGATAACTACAAAAGGAAATTCGCTGACCAGGAATTTAATGCAGTAAAAAGGAGGTGCAAGGTGCAAACTGGGGATAACTGCATGTGCATTATCACGGTAAAGAAGGAGCAGAAGAATTTAAAGCACTCAGTTATAAAAAGTGTTGTCGGAACCCTTGATTTGAATTTCCGATATCTACTGCAAGGGGAGACTTTTCCTGGGGAACGAGTAAAGGCTCCTATTTTTTGCACCATTAACAGAACAGCACCAAACAAATATGGTTATATTGCAAACTTGTGTGTTGCCAAATCAGCTCGCAGACATGGTATTGCAAGCAACATGATGTATTTTGCTGTTGAAACAGCAAAGTCTAATGCAGGTGTGACACAGGTATATGTGCATGTGGACAGAAATAATAGGCCTGCACAATTATTGTACCAAAAGCTGGGCTTTGAGATGGTTGAAACGGCAAACTCCCGATTATTACTGGAGGATACATACTTGCTGCGTTTACAGACGTAA 912 0.4189 MPPTSTIPIPRPEFHTLFFNGSPIPHKFPRIAASWTMTLDSKFSQTMNSNSMKKMKKKEELPVQQLSTPPVSKVETLSSDNLQFDRLQPSDHELVRENRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRTYDRYIDNYKRKFADQEFNAVKRRCKVQTGDNCMCIITVKKEQKNLKHSVIKSVVGTLDLNFRYLLQGETFPGERVKAPIFCTINRTAPNKYGYIANLCVAKSARRHGIASNMMYFAVETAKSNAGVTQVYVHVDRNNRPAQLLYQKLGFEMVETANSRLLLEDTYLLRLQT* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2005 303 Pfam Acetyltransferase (GNAT) family 162 281 IPR000182 GO:0016407
Lja6g2005 303 Gene3D - 108 303 - -
Lja6g2005 303 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 214 303 IPR000182 GO:0016407
Lja6g2005 303 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 303 - -
Lja6g2005 303 CDD NAT_SF 212 264 - -
Lja6g2005 303 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 303 - -
Lja6g2005 303 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 185 289 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja6g2005 Acetyltransf_1 1.3e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2005 - - gmx:100795426 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2005 6 48034573 48037098 Lja6g2005 6 48034573 48037098 ECH