Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1998 ATGGCTTCCATTCCAATTTCAACTCTCTCCTTCACCTTCATCCTCCTCCTCCTACAATGCCTCTCTGCATCATGCTCTTCCCCCAAGAAGACATACATTGTCCACATGAACCACCACACCAAACCCCAGATCTACCCCACCCGCCGCGACTGGTACACCGCCAGCCTCCGATCTCTTTCTCTCACAACTGACTCAGAAACCTCCGATGACCCACTTCTCTACGCCTACGACACCGCCTACAACGGTTTCGCCGCTTCCCTTGACGAACAACAAGCCCAGACCCTGCTCGGATCTGATTCCGTTCTGGGTCTCTATGAAGACACTCTCTACCATCTTCACACCACGCGTACTCCCCAGTTTCTGGGGCTTGACACACAAACGGGGTTGTGGGAAGGACATAGAACTCTGGAACTTGACCAGGCTTCTCGTGATGTTATCATTGGAGTGCTTGACACCGGAGTGTGGCCGGAGTCTCCTAGCTTCAACGACGCCGGAATGCCAGAGATCCCATCACGGTGGCGCGGTGAGTGTGAGAACGCCACTGATTTCTCATCCTCGCTTTGCAACAGGAAACTCATCGGAGCCAGAAGCTTCTCCAGAGGCTTCCACATGGCTGCCGGTAACGACGGCGGTTTCGGAAAAGAGAGAGAGCCACCGTCGCCGCGTGACAGCGACGGTCACGGCACCCACACTGCCAGCACCGCCGCGGGATCCCACGTCGGGAACGCTAGTCTCCTCGGTTACGCTAGCGGAACCGCTAGAGGCATGGCTCCACAGGCGCGTGTTGCCACGTACAAGGTTTGCTGGAGCGACGGTTGCTTCGCGTCCGACATTCTCGCCGGAATGGACCGCGCCATCAGGGACGGCGTTGATGTTCTCTCACTCTCCCTCGGTGGTGGGTCTGGTCCTTACTTCCGTGACACCATTGCCATCGGAGCGTTTGCAGCGATGGAGCGTGGGATCTTCGTGTCCTGCTCCGCCGGGAACAGCGGTCCAAGCAAAGCCTCACTCGCCAACGTCGCGCCGTGGTTGATGACCGTCGGCGCCGGAACGCTCGACCGGGATTTCCCCGCCTCGGCCTTGCTCGGGAACAAGAAGCGGTTCGCCGGGGTTTCTCTCTACAGCGGAAAAGGAATGGGGGCTGAACCGGTTGGTTTGGTTTACAGCAAGGGGTCGAACCAGTCCGGTATCTTATGCCTACCCGGTTCACTCGACCCGGCGGTGGTTCGTGGAAAAGTGGTTCTCTGCGACCGTGGGTTGAACGCGCGGGTGGAGAAGGGTAAAGTCGTGAAAGAAGCCGGCGGAATTGGGATGATTCTGACCAACACCGCCGCGAACGGGGAAGAGCTTGTGGCGGATAGTCACCTGCTACCGGCTGTTGCGGTTGGGAGAATCGTGGGGGACCAGATCAGAGAATACGTGACGTCTGATCCTAATCCAACGGCAGTTTTGAGTTTCAGTGGGACCGTTTTGAACGTTAGACCCTCCCCTGTGGTTGCAGCTTTCAGTTCTCGTGGTCCCAACATGATCACCAAGCAGATCCTGAAACCTGATGTGATTGGGCCTGGTGTTAACATCTTAGCAGGATGGTCAGAAGCTATTGGGCCCTCTGGGCTTCCTCAGGACTCTCGCAAATCACAGTTCAACATCATGTCAGGTACTTCAATGTCATGTCCACACATAAGTGGATTGGGCGCGTTGCTGAAAGCAGCACATCCAGATTGGAGTCCGAGTGCGATTAAATCAGCACTAATGACAACAGCTTATGTTCATGACAACACCAATTCACCGCTTCGCGATGCAGCTGGAGGGGAGTTTTCTACTCCATGGGCTCACGGTGCCGGCCATGTGAATCCGCAGAAAGCGCTATCTCCTGGACTTGTGTATGATGCTAAAGCAAGGGACTACATTGCGTTTTTGTGCTCGTTGGATTACTCACCTGACCACCTTCAGCTTATTGTGAAGCGGGCTGGAGTTAATTGTTCTAGGAAGTTGTCTGATCCTGGTCAGTTGAACTACCCGTCTTTCTCGGTGGTGTTTGACTCGGTGGTGTTTGACGCGAAGAAGGTTGTGAGGTACACGAGGACCGTTACCAATGTTGGCGAGGCGGGTTCTGTCTATGATGTTGTCGTTGATGGGCCTTCCATGGTTGGGATCACGGTGTATCCGACGAAGCTTGAGTTTGGGAAAGTAGGGGAGAGGAAAAGGTACACTGTGACCTTTGTGTCAAAGAAGGGTGCTTCTGATGATTTGGTTAGGTCTGCATTTGGTAGCATTACATGGAAAAATGAACAGCACCAAGTTAGAAGCCCTGTTGCTTTTGCTTGGACAGAGTTGTGA 2340 0.5457 MASIPISTLSFTFILLLLQCLSASCSSPKKTYIVHMNHHTKPQIYPTRRDWYTASLRSLSLTTDSETSDDPLLYAYDTAYNGFAASLDEQQAQTLLGSDSVLGLYEDTLYHLHTTRTPQFLGLDTQTGLWEGHRTLELDQASRDVIIGVLDTGVWPESPSFNDAGMPEIPSRWRGECENATDFSSSLCNRKLIGARSFSRGFHMAAGNDGGFGKEREPPSPRDSDGHGTHTASTAAGSHVGNASLLGYASGTARGMAPQARVATYKVCWSDGCFASDILAGMDRAIRDGVDVLSLSLGGGSGPYFRDTIAIGAFAAMERGIFVSCSAGNSGPSKASLANVAPWLMTVGAGTLDRDFPASALLGNKKRFAGVSLYSGKGMGAEPVGLVYSKGSNQSGILCLPGSLDPAVVRGKVVLCDRGLNARVEKGKVVKEAGGIGMILTNTAANGEELVADSHLLPAVAVGRIVGDQIREYVTSDPNPTAVLSFSGTVLNVRPSPVVAAFSSRGPNMITKQILKPDVIGPGVNILAGWSEAIGPSGLPQDSRKSQFNIMSGTSMSCPHISGLGALLKAAHPDWSPSAIKSALMTTAYVHDNTNSPLRDAAGGEFSTPWAHGAGHVNPQKALSPGLVYDAKARDYIAFLCSLDYSPDHLQLIVKRAGVNCSRKLSDPGQLNYPSFSVVFDSVVFDAKKVVRYTRTVTNVGEAGSVYDVVVDGPSMVGITVYPTKLEFGKVGERKRYTVTFVSKKGASDDLVRSAFGSITWKNEQHQVRSPVAFAWTEL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1998 779 Pfam PA domain 407 470 IPR003137 -
Lja6g1998 779 ProSiteProfiles Serine proteases, subtilase domain profile. 126 623 - -
Lja6g1998 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 113 IPR037045 -
Lja6g1998 779 Gene3D Peptidase S8/S53 domain 144 636 IPR036852 GO:0004252|GO:0006508
Lja6g1998 779 MobiDBLite consensus disorder prediction 207 236 - -
Lja6g1998 779 Pfam Subtilase family 143 592 IPR000209 GO:0006508|GO:0008236
Lja6g1998 779 Gene3D - 640 776 - -
Lja6g1998 779 PANTHER CUCUMISIN-RELATED 21 776 - -
Lja6g1998 779 CDD PA_subtilisin_like 362 482 - -
Lja6g1998 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 776 IPR045051 -
Lja6g1998 779 Gene3D - 353 491 - -
Lja6g1998 779 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Lja6g1998 779 Pfam Fibronectin type-III domain 670 773 IPR041469 -
Lja6g1998 779 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Lja6g1998 779 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lja6g1998 779 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Lja6g1998 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Lja6g1998 779 CDD Peptidases_S8_3 110 589 IPR034197 -
Lja6g1998 779 SUPERFAMILY Subtilisin-like 112 627 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1998 Lja-Chr6 47939041 47942132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1998 13 779 Subtilisin-like Serine Gene Family AT2G05920 68.229 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1998 - - gmx:100797543 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1998 6 47939041 47942132 Lja6g1998 6 47939041 47942132 ECH