Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1966 ATGAACAGAGGTGGTAGTGGAAAACTAACAAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCCTTCAGCACCAACAACAAGCAGAGTCGCGCCGTCGCCAACAATGAATCCTCTTCTTCCTCACCAGAACGGGAGTTATGTCCCGTACTGGTGGGGAAGACGCGAAGACGCTACCTTGTTAGCTCCGATGTTATCGGGCACCCGCTCTTCCGGGAGCTGGTGGATCGGTCACGCGGCGAGACCAATGAGGAGGAGGAGGACACCATCAACGTGGCCTGTGAGGTTGTCCTGTTCGAGCACCTGCTATGGATGCTGGAGAATGCTGATCCTCAACCAGATTCGTTGGACGAACTTGTCGACTTCTATGCATGCAGATAA 378 0.5291 MNRGGSGKLTKLKSVLKKWNSFSTNNKQSRAVANNESSSSSPERELCPVLVGKTRRRYLVSSDVIGHPLFRELVDRSRGETNEEEEDTINVACEVVLFEHLLWMLENADPQPDSLDELVDFYACR* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1966 125 MobiDBLite consensus disorder prediction 26 44 - -
Lja6g1966 125 Pfam Auxin responsive protein 14 105 IPR003676 GO:0009733
Lja6g1966 125 PANTHER SMALL AUXIN-UP RNA-RELATED 6 124 - -
Lja6g1966 125 MobiDBLite consensus disorder prediction 26 45 - -
Lja6g1966 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1966 Lja-Chr6 47547475 47548040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1966 7 105 Calmodulin-binding Proteins AT4G34750 27.273 8.90e-09 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1966 6 47547475 47548040 Lja6g1966 6 47547475 47548040 ECH