Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1947 ATGGACATGAATTTCTCCCCATACAATGATTACTGGAGAGAAATCAGAAAAATTGCTGCCATCCATTTCTTCAGCGCCAAAAAGGTCTCTAGCTTTGCCCATGTAAGAAAATCTGAGGTCAAGAAAATGATTCAAAAGATATCTACCCATGTTTCTTCTTCCAAAGTCACAAACTTGAGTGAGATCATAATGTCTGTCGCAAGCTGTACAATTTCCAGGATTGCTTTTGGTAGAATCTATGATGAGGATGGAGCTGAAACAAGCATCTTCCATAACCTTCTTGTTCAGGGACAGGCCATGTTTCTAACCTTCTTCTTTTCAGATTATATTCCTTTCATGGGCTGGATCGACAAACTAACAGGCTCACTCGCTCGTCTTGATAAAACTATCAACTCATTCGATGCCTTTTTCCAACAAGTCCTTGACGAGCACCTCGATCCTAATAGGAACAAAGATCAAACCCAAGAGGATGATATAGTTGAAACACTACTCCAGCTTAGGAACCAGGGTTCCCTCTCAATTGATCTCACCGATGATCACATTAAAGCTTTCATGATGGACCTCCTTATAGGATCAACTGACACGAGTGTAGCCGCATCAGTTTGGCTTATGACTGGATTAATGAAGAACCCAACAGCAATGAAGAAAGCCCAAGAAGAAGTAAGAAATCTTTGTGGCAACAAAGACTTCATCGATGAAGTGGATATTCAAAAACTCGACTATTTGAAGGCAGTTATAAAAGAGACACTCAGGTTTTATCCGCCGGCACCGCTTATACCAAGAGAAACAATTAAAAGTATCATTGTAGATGGGTATGAAGTACCGGCCAAGACAATAGTGTATGTAAACGTTTGGGCCATCCATAGGGACCCTGAGGCATGGGAAAACCCACATGAGTTCTGTCCCGACAGATTCTTAAACAAGGACATAGAGTTTAAGGGACGAGATTTTGAGTTGATTCCATTCGGAGCCGGACATAGAGTTTGCCCTGGCATGCCACAAGGAATCGCCACATTGGAGCTCATAGTTGCAAATCTACTAAATTCATTTGATTGGGAAACGCCTCCTGGGATGACAAGGGAAGATATTGATGATGAAGGGCTACAAGGACTTGCCCGACACAAGAAGAATCACCTCTGTCTTGTTGCCAAGAATCGTATGTGA 1164 0.421 MDMNFSPYNDYWREIRKIAAIHFFSAKKVSSFAHVRKSEVKKMIQKISTHVSSSKVTNLSEIIMSVASCTISRIAFGRIYDEDGAETSIFHNLLVQGQAMFLTFFFSDYIPFMGWIDKLTGSLARLDKTINSFDAFFQQVLDEHLDPNRNKDQTQEDDIVETLLQLRNQGSLSIDLTDDHIKAFMMDLLIGSTDTSVAASVWLMTGLMKNPTAMKKAQEEVRNLCGNKDFIDEVDIQKLDYLKAVIKETLRFYPPAPLIPRETIKSIIVDGYEVPAKTIVYVNVWAIHRDPEAWENPHEFCPDRFLNKDIEFKGRDFELIPFGAGHRVCPGMPQGIATLELIVANLLNSFDWETPPGMTREDIDDEGLQGLARHKKNHLCLVAKNRM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1947 387 PRINTS E-class P450 group I signature 283 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS E-class P450 group I signature 180 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS E-class P450 group I signature 319 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS E-class P450 group I signature 243 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS E-class P450 group I signature 66 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS E-class P450 group I signature 329 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS E-class P450 group I signature 200 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 387 - -
Lja6g1947 387 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 322 331 IPR017972 GO:0005506|GO:0016705
Lja6g1947 387 Pfam Cytochrome P450 8 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS P450 superfamily signature 244 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS P450 superfamily signature 191 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PRINTS P450 superfamily signature 320 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 PANTHER CYTOCHROME P450 71B11-RELATED 1 387 - -
Lja6g1947 387 Gene3D Cytochrome P450 1 386 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1947 387 SUPERFAMILY Cytochrome P450 3 386 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1947 Lja-Chr6 47324109 47325965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1947 2 382 Cytochrome P450 AT4G31500 46.234 2.67e-124 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1947 - - lja:Lj6g3v1138550.1 777.319