Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1918 ATGGGGAAGAACAGTTTTTTAGTACATTTGGTGGTGGTGTTTTGCTTGGGGATGGTTTTACCTTGTTTGTGTGTTGATGATCCAGATAATGCTACTTCTGATGTGTATGTTGTTACTCTGAGACATGCTCCTGCTTCTCAGTACTATGGTGAGCTGAAAACTGTGGATAATGGCTTCAAACATGATGCTTCTGGGAGAACTCAATTTCACAAACCAAGATCTAGCAATCTTACAAAGACAGAAAAGATATATGGCTCTTACATTGCTCAAGCTCATGATTCTTTGTTGAAGAAAGTGTTAAAAGGAGAGAAATATATGAAGCTCTATAGTTACCATTACCTGATAAATGGATTTGCTGTGCTGGTTACCCAACAGCAGGCAGAGAAACTATCTAGGAGCAGTGACGTGTCGAATGTGGTTTTGGATTTCGCTGTAAGAACTGCAACTACGCATACACCACAGTTTTTGGGTCTGCCGCTGGGAGCATGGTCTCAAGATGGTGGGTTTCAAACTGCTGGAGAAGGGGTTGTTATTGGGTTTGTTGACACTGGCATAGATCCAACACACCCTAGCTTTGGTGATACTAAGTCTGATCATTCATATCCTGTTCCTGCTCATTTTTCTGGCGTCTGTGAGGTTACTAGGGATTTTCCGTCTGGTTCTTGCAATAGAAAACTTGTTGGGGCCCGTCATTTTGCTGCATCTGCTATAACCAGGGGAATATTTAATGTTTCTCAAGACTATGCTTCTCCCTTCGATGGCGATGGCCATGGCACGCATACAGCATCTACTGCAGCAGGAAACCATGGGATTCCAGTGATTGTTGCCGGGCATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGATCACACATTGCTGTTTACAAGGCGTTATACAAACGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCTTGTCAATCACTCCTAATAGGCGTCCTCCAGGTGTTGCAACTTTCTTCAATCCGATCGACATGGCCTTACTTTCAGCTGTAAAAGCTGGCATTTTTGTAGTGCAAGCTTCAGGAAATACTGGACCATCACCAATGAGCATGTCCTCTTTCAGTCCATGGATCTTTAGTGTCGGTGCTGCTTCTCATGACCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCCTACCTGGAGTAATACTTGCACCTGGCACAGCTGAAAACAAACTTTACAAATTAATTTTTGCACGCCATGCTCTGAACAACGACACTACGGTTGCTGATGATATGTATGTCGGTGAGTGCCAAGATGCAAGTAAGTTCAATAAGGATTTGATCCGAGGGAACCTCTTGATGTGCAGCTATTCTATTCGGTTTGTGCTGGGGATGTCCAATGTCAAACTGGCCGAACAAACAGCTAAGAACCTTAGTGCAGTTGGTATTGTCTTCTATATGGATCCTTATGTGATTGGTTTTCAGCTTAACCCAATTCCATTGAAAATGCCTGGCATACTAGTTGTATCCACAAATGATACCAAGATTTTGATGCAATACTACAATTCTTCATTGGAGATAGATCCAGCTTCAAAGAAAGTTGTTAAATTTGGGGCAGTTGCCCGTATCTGTGGTGGACTAAAAGCAAACTACAGTAATAATGCCCCAAAGGTTATGTATTACTCTTCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCCAACTTGTTAGCTCCTGGAAATTTTATATGGTCTGCTTGGAGTTCTCTTGGCGCCGATTCTGCTGAATTTCAAGGTGAGAATTTTGCACTGATGTCCGGCACGAGTATGGCTGCACCACATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAAGTTCCCAAATTTCAGTCCTGCAGCCATTGGATCTGCGCTTTCTACTACTGCATCCCAGTATGACAAGAGTGGCGGACCAATAATGGCTCAGCGATCATCTGCTTTTCCAGATGAAAACCAAACTCCGGCAACTCCTTTTGACATGGGGTCTGGGTTTGTGAATGCAACTGGAGCACTGAATCCGGGTTTGGTTTTTGATTCCAGTTATGATGATTACATGTCATTTCTGTGTGGTATCAATGGTTCAGCTCCGGTGGTGCTAAACTACACTGGTCAAAATTGTGGGAGCTATAACAGCACTGTACTTGGTCCTGATCTGAACTTGCCCTCAATCACTTTATCAAAGCTAAACCAATCTAGAATAGTGCAGAGGACAGTCCTAAACATTGCAGGGAATGAAACTTATAGTGTTGGTTGGGATGCTCCTTCTGGGGTTTCAGTGAAAGTGACTCCAAGTCACTTCACTATTGCCAATGGTGAAAGGAAAGTCTTGTCTGTCCTCTTGAATGCAACCCTTAACAGCACCGTTGCCAGCTTTGGGAGGATTGGGCTGTTTGGTAATCAAGGTCATGTTGTCAATATTCCTGTGTCAGTCACTGTCAAAATATCAAATAACATCACGAAGAGTTAA 2541 0.4345 MGKNSFLVHLVVVFCLGMVLPCLCVDDPDNATSDVYVVTLRHAPASQYYGELKTVDNGFKHDASGRTQFHKPRSSNLTKTEKIYGSYIAQAHDSLLKKVLKGEKYMKLYSYHYLINGFAVLVTQQQAEKLSRSSDVSNVVLDFAVRTATTHTPQFLGLPLGAWSQDGGFQTAGEGVVIGFVDTGIDPTHPSFGDTKSDHSYPVPAHFSGVCEVTRDFPSGSCNRKLVGARHFAASAITRGIFNVSQDYASPFDGDGHGTHTASTAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKRFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQASGNTGPSPMSMSSFSPWIFSVGAASHDRVYSNSIFLGNNVTLPGVILAPGTAENKLYKLIFARHALNNDTTVADDMYVGECQDASKFNKDLIRGNLLMCSYSIRFVLGMSNVKLAEQTAKNLSAVGIVFYMDPYVIGFQLNPIPLKMPGILVVSTNDTKILMQYYNSSLEIDPASKKVVKFGAVARICGGLKANYSNNAPKVMYYSSRGPDPEDSLPHEADILKPNLLAPGNFIWSAWSSLGADSAEFQGENFALMSGTSMAAPHVAGLAALIKQKFPNFSPAAIGSALSTTASQYDKSGGPIMAQRSSAFPDENQTPATPFDMGSGFVNATGALNPGLVFDSSYDDYMSFLCGINGSAPVVLNYTGQNCGSYNSTVLGPDLNLPSITLSKLNQSRIVQRTVLNIAGNETYSVGWDAPSGVSVKVTPSHFTIANGERKVLSVLLNATLNSTVASFGRIGLFGNQGHVVNIPVSVTVKISNNITKS* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1918 846 ProSiteProfiles Serine proteases, subtilase domain profile. 162 696 - -
Lja6g1918 846 Pfam Subtilase family 173 659 IPR000209 GO:0006508|GO:0008236
Lja6g1918 846 ProSitePatterns Serine proteases, subtilase family, serine active site. 619 629 IPR023828 -
Lja6g1918 846 SUPERFAMILY Subtilisin-like 148 700 IPR036852 GO:0004252|GO:0006508
Lja6g1918 846 Gene3D - 713 838 - -
Lja6g1918 846 Pfam Peptidase inhibitor I9 35 148 IPR010259 -
Lja6g1918 846 Gene3D Peptidase S8/S53 domain 175 709 IPR036852 GO:0004252|GO:0006508
Lja6g1918 846 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 839 IPR045051 -
Lja6g1918 846 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 146 IPR037045 -
Lja6g1918 846 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 24 839 - -
Lja6g1918 846 CDD Peptidases_S8_3 148 655 IPR034197 -
Lja6g1918 846 Gene3D - 388 556 - -
Lja6g1918 846 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 178 189 IPR023827 -
Lja6g1918 846 CDD PA_subtilisin_like 397 529 - -
Lja6g1918 846 Pfam Fibronectin type-III domain 742 835 IPR041469 -
Lja6g1918 846 PRINTS Subtilisin serine protease family (S8) signature 253 266 IPR015500 -
Lja6g1918 846 PRINTS Subtilisin serine protease family (S8) signature 618 634 IPR015500 -
Lja6g1918 846 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1918 Lja-Chr6 46887154 46893948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1918 10 841 Subtilisin-like Serine Gene Family AT4G20430 67.536 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1918 - - gmx:100796456 1418.68