Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1865 ATGTCCCCAGCTGCAGGAGCTGTAGCATTGCACTCTTCCCTGTGCACAATCTCTCCTGATAAACCATCACCTCCTTCCACCTCAACCACCCTGCTGATTACCAAACCCAAAAGCCTCCTTCAAAACCATCCACTTTACACACCAACAACCCATGCAAAACTCTCCCTTCAGTTCAAAGAGAAAATCCTCTGCCTTGAGGTAATGGGTGTTGATGCAGGGAGAGCACTGTCTCAAAACCCTGACCTCCGGACAGCCACCATGGAATCCATTCAATCCATCATCAGCTTCCTTCTCTCCAAAGGCATCCAGCACAAGGACTTGCCAAGAATCTTTGGCATGTGCCCCAAGATTCTCACCTCTGACATCAAAACTGAACTCAACCCTGTTTTTGATTTTCTCCTGCATGACCTCAAAGTCCCAGATTACAATTTCAGGAAGGTTATCAATAAATGTCCAAGATTGCTTACATCTAGTGTGAGAGACCAGCTTAAGCCAGCTTTGTTTTACCTCAAGAGGCTTGGATTCAAGGATTTGACACCCTTGGCTTATCAAGATTCTGTTCTGTTGGTGTCTAATTATTTGGAGAACTTGGGGTTTTCTAAGGGGGAGGCTAGAAGTTTGGTGTTGAGGTGTCCAGCATTGTTCACTTTCAGCATAGAAAATAATTTTGAGCCTAAGTTTGAGTACTTTGCTGGGGAAATGGGGAGGAAATTGGAGGAGCTGAAGGAATTTCCTCAGTACTTTGCTTTTAGTTTGGAGAACAGGATAAAGCCTAGGCACATGGAGGTTGTGCAATGTGGGATCAATTTACCTTTGTCAGTGATGCTTAAAAGCACTGATGAAGAATTTAGGGAGCTGATAAAGCAGGGGGATGGATGA 879 0.4471 MSPAAGAVALHSSLCTISPDKPSPPSTSTTLLITKPKSLLQNHPLYTPTTHAKLSLQFKEKILCLEVMGVDAGRALSQNPDLRTATMESIQSIISFLLSKGIQHKDLPRIFGMCPKILTSDIKTELNPVFDFLLHDLKVPDYNFRKVINKCPRLLTSSVRDQLKPALFYLKRLGFKDLTPLAYQDSVLLVSNYLENLGFSKGEARSLVLRCPALFTFSIENNFEPKFEYFAGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQCGINLPLSVMLKSTDEEFRELIKQGDG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1865 292 Pfam mTERF 65 175 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 Pfam mTERF 190 283 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 Gene3D Transcription termination factor 3, mitochondrial 37 289 IPR038538 -
Lja6g1865 292 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 289 - -
Lja6g1865 292 SMART mt_12 205 237 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 SMART mt_12 238 269 IPR003690 GO:0003690|GO:0006355
Lja6g1865 292 PANTHER CGI-12 PROTEIN-RELATED 16 289 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lja6g1865 mTERF 2.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1865 K15032 - gmx:100788221 451.44