Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1864 ATGTCGTCACGTTCCGGCAACGGCGGAAGCAGGACCCGGGTGGGGAAGTACGAGCTGGGTCGGACTCTGGGTGAGGGCAATTTCGCTAAGGTCAAGTTTGCCAGGCACGTGGGCACCGGGGATCACGTGGCCATCAAGATTCTCGACAAGGAAAAAGTTCTCAAGCATAAGATGATTGGCCAGATAAAACGAGAAATATCAACAATGAAACTGATTAGGCACCCAAATGTCATACGCATGCATGAGGTGATGGCTAGCAAGACAAAGATCTATATTGTATTGGAATTTGTGACTGGTGGGGAGCTATTTGATAAAATTGCACGCAATGGGAGGTTGAAAGAAGATGAAGCAAGAAAATACTTTCAACAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTTCCACAGAGACCTAAAGCCTGAGAATTTATTGCTGGATGCTAATGGAACGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTAGCTCCAGAGGTGATCCACAACAAAGGCTATGATGGAGCAAAGGCAGATCTCTGGTCATGCGGTGTTATTCTCTTTGTTTTAATGGCTGGCTATCTGCCCTTCGAAGAAAACAATCTTATGGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACGTGTCCCCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAAAAGAATACTGGATCCCAGTCCTGCTACAAGGATTACAATTGCTGAGGTCATTGAGAATGAGTGGTTCAAAAAGGGATATAAGCCTCCGGTATTTGAACAGGCTAATGTTAGTCTTGATGATGTAAATTCAATTTTCAGTGAATCCATGGATTCACAAAATCTTGTTGTTGAGAGGCGTGAAGAGGGGCATGCGGCACCTGTGACCATGAATGCATTTGAGCTAATATCTAAATCTCAAGGCCTCAACCTTAGTAGTCTTTTCGAGAAGCAAATGGGACTTGTTAAAAGGGAAACAAGATTCACTTCCAAATGTTCAGCAGATGAGATAATTGCAAAAATTGAGCAAGCTGCAGGACCTCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGCTTCAAGGGGAAAAGACTGGAAGGAAAGGTCATCTTTCTGTAGCCACTGAGATCTTGGAGGTGGCTCCTTCACTTCACATGGTTGAGTTGCGCAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAACCTAGCTACTGGGCTTAAAGATATTGTTTGGAAAGCAGACCCTATTGATGAAGAAAAACCTAAACCTAATGGTTCCACTGCAGCGAAATGA 1374 0.4294 MSSRSGNGGSRTRVGKYELGRTLGEGNFAKVKFARHVGTGDHVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVLEFVTGGELFDKIARNGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGTLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEENNLMALYKKIFKAEFTCPPWFSSSAKKLIKRILDPSPATRITIAEVIENEWFKKGYKPPVFEQANVSLDDVNSIFSESMDSQNLVVERREEGHAAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIIAKIEQAAGPLGFDVKKNNCKLKLQGEKTGRKGHLSVATEILEVAPSLHMVELRKSEGDTLEFHKFYKNLATGLKDIVWKADPIDEEKPKPNGSTAAK* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1864 457 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lja6g1864 457 Gene3D Kinase associated domain 1, KA1 314 439 - -
Lja6g1864 457 Gene3D Transferase(Phosphotransferase) domain 1 97 279 - -
Lja6g1864 457 SUPERFAMILY Protein kinase-like (PK-like) 14 299 IPR011009 -
Lja6g1864 457 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1864 457 PANTHER SERINE/THREONINE KINASE 11 444 - -
Lja6g1864 457 Gene3D Phosphorylase Kinase; domain 1 7 96 - -
Lja6g1864 457 Pfam NAF domain 316 376 IPR004041 GO:0007165
Lja6g1864 457 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1864 457 CDD CIPK_C 320 435 - -
Lja6g1864 457 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Lja6g1864 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lja6g1864 457 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1864 457 CDD STKc_SnRK3 16 271 - -
Lja6g1864 457 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1864 Lja-Chr6 45961713 45970115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1864 2 447 CBL-interacting serine-threonine protein kinases AT1G01140 69.690 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lja6g1864 Pkinase 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1864 - - gmx:100788746 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1864 6 45961713 45970115 Lja6g1864 6 45961713 45970115 ECH