Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1854 ATGTTGACACTGAAGGGAGGAAGCAGGCCACCGTGGGTAGGTCTAGGAGCAGCGGTGTGGGTTCAGATTGCTTCCGGCAACACCTTCACTTTCGCTCTCTACTCTCACTCTCTCAAATCCGTTCTCGGTTTCAACCAGCGCCAGCTCTCTCTCCTCGGCGTCGCCAACGATCTCGGCGAGAATTTTGGCATCCTCCCTGGTCTCGCCTGCAACAAGTTCCCGCCCTGGCTCCTCCTCTGTGTCGGTTCTCTTACCTCTTTCCTCGGTTATGGTGTTCTCTACCTCGCTCTCACCAAAACCGTTTCCATCCCTTACTTCGTGTTATGGTTGGCTCTGGTTATTGCTGCAAACAACACTGCGTGGTTAACCACTGCTGTTCTTGTAACCAACATGAGAAACTTCCCTGTTAGTAGAGGCAAAGTTTCAGGAATCCTGAAAGGTTATGGGGGGCTCAGCGCTGCAGTTTTTACTGAAATTTACAGCATCGTGCTTCATAATGATTCTCCTAACTTCCTGTTGTTGCTTGCCGTTGGTATTCCTGTTATTTGCTTAAGTATGATGTTTCTTGTTAGGGCTTGTACTCCAGCTTCTGATGAAGACTCTGTAGCTAGTGGCCAATTTATATTTATCCAAGTTTCTAGCGTGGTCTTGGGGTTGTATCTTCTAGCAACCACAATATTTGGCAATGCTCTTCAATTAAGTGACACTGTTTCCTCTATTTTGGTGGCTGTAATGATTCTTCTTCTCATGGCTCCAATTTCTGTCCCCCTGAAGATGACTCTGTTTCCTAAGAAAGCTAGTACTGACTCATCTGAGCAACTACTTGGATCTTCTGAGTCTCTTAGTCGAGACAAAGATGACAAAACAGAACCACTGCTAGCATCTTCATCAGCAGGAGCCCTTGGAAGTTTTAATGATGAGGATGATTCATCTGAGGTAGCTATGCTTCTTGCTATAGGTGAGGGAGCAGTAAAGCAGAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTCACCGAGGCTGTAGTAAAGGCTGATTTCTGGCTTCTATTTTTTGTTTATTTTGTTGGTGTTGGCACTGGGGTCACTGTTCTCAATAATCTAGCTCAAATAGGTATTGCACAAGGCGAGGAAGATACCACTATATTACTGTCAATTTTCAGTTTTTGCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACACTCCCAAGGACAGCCTGGTTGACATGCACACAAATAGTTATGCTCATCATGTATGTTCTGTTTGCCTTTGCTGTCAAAGGAGCCCTTTATCCTGCAGTTGCATTCCTTGGTATCTGCTATGGTGTGCAAGTTTCTGTGATGATCCCCACCGTTTCCGAGCTTTTTGGTTTGAAGCACTTTGGTGTGTTGGGCAGCGTCATGTCCATCGGTAATCCACTTGGTGCGTTCCTTTTCTCAGCTCTGCTAGCAGGTTATATATATGATAGTGAGGCTGCAAAGCAGCATGGTATTAACCTTATAGCTTCTGGTGCTGCCTGCGTGGGTGCAAACTGCTTTAAGCTGACCTTTTTGATTCTTGCTGGTGTTTGTGGCGCTGGCATCATCTTGAGCATTATTCTGACACTGAGAATTAAGCCAGTTTACCAGATGCTTTATGCCGGAGGTTCTTTCAAGCTGCCTCAAAGATCTTGA 1704 0.4548 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFALYSHSLKSVLGFNQRQLSLLGVANDLGENFGILPGLACNKFPPWLLLCVGSLTSFLGYGVLYLALTKTVSIPYFVLWLALVIAANNTAWLTTAVLVTNMRNFPVSRGKVSGILKGYGGLSAAVFTEIYSIVLHNDSPNFLLLLAVGIPVICLSMMFLVRACTPASDEDSVASGQFIFIQVSSVVLGLYLLATTIFGNALQLSDTVSSILVAVMILLLMAPISVPLKMTLFPKKASTDSSEQLLGSSESLSRDKDDKTEPLLASSSAGALGSFNDEDDSSEVAMLLAIGEGAVKQKKRRPKRGEDFKFTEAVVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGEEDTTILLSIFSFCNFVGRLGGGVVSEHFVRTKTLPRTAWLTCTQIVMLIMYVLFAFAVKGALYPAVAFLGICYGVQVSVMIPTVSELFGLKHFGVLGSVMSIGNPLGAFLFSALLAGYIYDSEAAKQHGINLIASGAACVGANCFKLTFLILAGVCGAGIILSIILTLRIKPVYQMLYAGGSFKLPQRS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1854 567 SUPERFAMILY MFS general substrate transporter 11 191 IPR036259 -
Lja6g1854 567 CDD MFS_Mch1p_like 10 538 - -
Lja6g1854 567 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 566 - -
Lja6g1854 567 Gene3D MFS general substrate transporter like domains 11 200 IPR036259 -
Lja6g1854 567 Gene3D MFS general substrate transporter like domains 344 552 IPR036259 -
Lja6g1854 567 Pfam Nodulin-like 11 257 IPR010658 -
Lja6g1854 567 SUPERFAMILY MFS general substrate transporter 250 550 IPR036259 -
Lja6g1854 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1854 Lja-Chr6 45872668 45876414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1854 2 567 Nodulin-like Gene Family AT1G80530 54.401 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1854 - - gmx:100794012 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1854 6 45872668 45876414 Lja6g1854 6 45872668 45876414 ECH
Lja4g1851 4 18140496 18144430 Lja6g1854 6 45872668 45876414 PCT