Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1832 ATGGAGATTTTCAAATGCTTCTTCTACTTTAATCTTCTCACTACTTTCATGTTATCAGCAGTTTTAGCCATAGACCCTTATTCAGAGGCACTCCTGAGTCTCAAATCTGAACTTGTAGATGATGATAATAGTTTGCATGACTGGGTAGTGCCCTCTGGAGGGAACTTAACTGGAAAATCCTATGCATGTTCTTGGTCTGGAATCAAGTGTAACAAAGACTCAACAATTGTAACTTCCATAGACCTGTCCATGAAGAAACTTGGTGGTGAATTATCAGGGAAGCAATTTGCCATCTTCACAAAGCTTGTTGATCTTAACCTGAGCCACAATTTCTTCTCTGGAAAGCTGCCAGCAGAAATTTTTAACCTCACCAGCCTAAAGAGCTTGGATATCAGCAGGAATAATTTTTCAGGTACCTTCCCTGGAGGAATTCACAGCCTCCAAGATTTGGCTGTGCTTGATGCCTTCAGCAACAGCTTTTCAGGGTCTCTTCCTGCAGAATTTTCACAGCTAGAACAGCTTAAAGTTCTTAATCTTGCTGGGAGTTACTTCAGAGGATCAATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTCCATCTTGCAGGAAATTCTCTCACAGGAAGCATACCTCCGGAACTGGGTAACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACTTATACCAGGGTTTCATTCCACCCCAGCTAGGTAATATGAGCCAGCTTCAGTATCTTGACATGGCAGGTGCAAATCTTTCTGGTCCAATACCAAAGGAGCTCTCCAATCTCACCAGTTTGCAATCACTTTTTCTGTTCAGAAACCAGCTCACTGGATCAATACCAAGTGAGTTAAGCAAAATCAAACCTCTCACAGATTTAGATCTCTCTGATAACTTCCTTTCAGGATCCATTCCTGAAAGCTTCTCAGAGCTGAAGAACCTGAGACTGCTTAGTGTCATGTACAATGACATGAGTGGCTCTGTTCCTGAAGGCATTGCAGAACTCCCATCCTTGGAAACTCTTCTCATTTGGACCAATCGCTTCTCTGGTTCGCTCCCACGGAGCCTAGGCAGGAATTCCAAGCTCAAATGGGTGGATGTCTCCACAAACAATTTCATTGGCAGCATACCAGAAGACATTTGTGTGAGTGGAGTACTATCTAAGCTGATCCTGTTTTCAAACAAATTCACAGGTGGTCTTTCATCAATCTCCAACTGTTCTTCCCTTGTTCGTCTTCGTCTAGAAAATAATTCTTTCTCAGGAGAGATCCGTTTAAAATTCAGCCATCTTCCTGATATCTCATACATCGATCTGTCCAGAAACAATTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCAACTCAACTGGAGTATCTCAATGTGTCTTATAATCTGCAATTAGGAGGCACCATCCCATCACAAATGTTGTCTTTGCCCCTGCTTCAAAATTTGTCAGCATCTTCTTGTGGTATTAAAGGCGATCTTCCGCCATTTGCGTCCTGCAAATCAATTTCAGTCATTGATCTTGATAGGAACAACTTATCCGGAATCATCCCAAACAGTGTTTCCAAATGTCAAGCTCTTGAAAAAATCAATTTATCAGACAATGATCTGATAGGTCAAATTCCTGAGGAGCTAGCCAGTATCCCTGTTATTGGTGTAGTAGACTTATCTAACAATAAGTTCAGTGGCAACATACCTGCAAAGTTTGGTAGTTCTTCAAATTTGCAACTCCTCAATGTGTCTTTCAACAATATCTCCGGTTCAATACCCACAGGGAAGTCATTCAAATTAATGAGTAGCAGTGCATTTGAAGGAAATTCAGAGCTATGTGGAGCACCTCTAAAGCCATGTCCTGATTCAGTTGGAATATTGGGCAGCAAGGGCACACGGAAGCTTACACGTATTCTGCTACTCACTGCGGGGTTGATAATAATCTTTCTAGGAATGGCTTTTGGAGTGCTTTATTTCAGAAAGGCAGTTAAAAGTCAATGGCAGATGGTTTCATTTGTTGGACTACCTCAATTCACAGCAAATGATGTTTTGACAAGCTTGATTGCCACAAAACAAACAGAAGTCCCATCACCATCACCTGCAGTTACAAAGGCAGTTCTTCCTACGGGTATAACAGTTTTAGTCCAGAAGATTGAATGGGAAAAAAGGAGCATTAAGGTGGTGTCACAATTTATAATGCAACTAGGAAATGCAAGGCACAAGAATTTAATCAGACTGTTGGGTTTTTGCCACAACCAGAATCTAGTTTATCTCTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAATATTGGAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCCATTCCCCATGGAGACTTGAAGTCCAGCAACATTGTATTCGATGAAAATATGGAACCCCATTTGGCAGAATTTGGGCTCAAACATGTGTTGAACTTGAGCAAAGGCTTATCTACAACCACAACTAAGCAGGAAACAGAATACAATGAAGCAATGAAAGAGCAACTCTGCATGGATGTCTACAAGTTTGGGGAGATTGTTCTGGAAATTTTAACTGGCGGAAGGTTGACAAGTGCAGCAGCTAGCTTACACAGCAAATCATGGGAAGTTCTCCTAAGAGAAGTTTGCAATTATAACGAAATGAGTTCTGCCAGTTCATTGCAAGAGATTAAACTGGTTCTTGAGGTTGCTATGCTCTGCACTAGAAGCAGGTCAACCGATCGGCCATCCATAGAAGAAGCTCTGAAGCTTTTATCAGGGTTAAAGCGCATAGAAGATTACAAAACTTCTAAAGAAGGGAAATGA 2877 0.415 MEIFKCFFYFNLLTTFMLSAVLAIDPYSEALLSLKSELVDDDNSLHDWVVPSGGNLTGKSYACSWSGIKCNKDSTIVTSIDLSMKKLGGELSGKQFAIFTKLVDLNLSHNFFSGKLPAEIFNLTSLKSLDISRNNFSGTFPGGIHSLQDLAVLDAFSNSFSGSLPAEFSQLEQLKVLNLAGSYFRGSIPSEYGSFRSLEFLHLAGNSLTGSIPPELGNLKTVTHMEIGYNLYQGFIPPQLGNMSQLQYLDMAGANLSGPIPKELSNLTSLQSLFLFRNQLTGSIPSELSKIKPLTDLDLSDNFLSGSIPESFSELKNLRLLSVMYNDMSGSVPEGIAELPSLETLLIWTNRFSGSLPRSLGRNSKLKWVDVSTNNFIGSIPEDICVSGVLSKLILFSNKFTGGLSSISNCSSLVRLRLENNSFSGEIRLKFSHLPDISYIDLSRNNFVGGIPSDISQATQLEYLNVSYNLQLGGTIPSQMLSLPLLQNLSASSCGIKGDLPPFASCKSISVIDLDRNNLSGIIPNSVSKCQALEKINLSDNDLIGQIPEELASIPVIGVVDLSNNKFSGNIPAKFGSSSNLQLLNVSFNNISGSIPTGKSFKLMSSSAFEGNSELCGAPLKPCPDSVGILGSKGTRKLTRILLLTAGLIIIFLGMAFGVLYFRKAVKSQWQMVSFVGLPQFTANDVLTSLIATKQTEVPSPSPAVTKAVLPTGITVLVQKIEWEKRSIKVVSQFIMQLGNARHKNLIRLLGFCHNQNLVYLLYDYLPNGNLAENIGMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLKSSNIVFDENMEPHLAEFGLKHVLNLSKGLSTTTTKQETEYNEAMKEQLCMDVYKFGEIVLEILTGGRLTSAAASLHSKSWEVLLREVCNYNEMSSASSLQEIKLVLEVAMLCTRSRSTDRPSIEEALKLLSGLKRIEDYKTSKEGK* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1832 958 SUPERFAMILY Protein kinase-like (PK-like) 705 945 IPR011009 -
Lja6g1832 958 Gene3D Transferase(Phosphotransferase) domain 1 764 957 - -
Lja6g1832 958 SMART serkin_6 704 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1832 958 Pfam Protein kinase domain 729 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1832 958 ProSiteProfiles Protein kinase domain profile. 646 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1832 958 Gene3D Ribonuclease Inhibitor 505 623 IPR032675 -
Lja6g1832 958 SUPERFAMILY RNI-like 79 401 - -
Lja6g1832 958 SMART LRR_typ_2 267 291 IPR003591 -
Lja6g1832 958 SMART LRR_typ_2 339 363 IPR003591 -
Lja6g1832 958 SMART LRR_typ_2 99 123 IPR003591 -
Lja6g1832 958 SMART LRR_typ_2 195 219 IPR003591 -
Lja6g1832 958 Gene3D Phosphorylase Kinase; domain 1 701 763 - -
Lja6g1832 958 PANTHER UNNAMED PRODUCT 5 947 - -
Lja6g1832 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 947 - -
Lja6g1832 958 Pfam Leucine rich repeat 294 351 IPR001611 GO:0005515
Lja6g1832 958 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Lja6g1832 958 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Lja6g1832 958 Gene3D Ribonuclease Inhibitor 387 503 IPR032675 -
Lja6g1832 958 SUPERFAMILY L domain-like 333 616 - -
Lja6g1832 958 Gene3D Ribonuclease Inhibitor 184 287 IPR032675 -
Lja6g1832 958 Gene3D Ribonuclease Inhibitor 288 386 IPR032675 -
Lja6g1832 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1832 Lja-Chr6 45659190 45662481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1832 7 943 Receptor kinase-like Gene Family AT5G51350 53.952 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja6g1832 Pkinase 4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1832 - - aprc:113852384 1601.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1832 6 45659190 45662481 Lja6g1832 6 45659190 45662481 ECH