Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1821 ATGGAACTCAACACTGAGTATCTGTACACAGCACTTGCCAGTGTTGTGAGCATTCTATTGATTTCTTATTACTATGCCCACGTTACAAAGAGCACTAAGACTAAGCCACCCCTAGCCGCCGGTGGCTGGCCTTTAATCGGTCACCTCCACCTCTTAGGCGGTTCCCGCCACCCACCTTACATAACCTTAGGAGACTTAGCAGACAAGCACGGGCCCATCTTCAGCATCCGATTCGGGGTGCACCCAGCTGTGGTGGTCAGCACATGGGAGCTAGCCAAGGAGATCTTCACCTCCCTCGACGTCATCGTCTCCGATCGTCCCAAATACACCGCTGCAAAGATCCTCGGCCACGACTACGCCAACTTCGGGTTCTGCCCTTATGGTGAGTACTGGCGCGTGATGCGGAAGCTAACCGCCTCGGAGCTTCTCGCCACGCGCCGGTTTGACTCGCTTAGAGAGATAAGGGATTACGAGGTGAGGAGCGCGGTCGAAGAGCTGTTACTCAGAGCGCGCTCCTCACCTCGTGATTCTTCCGTTGTTGTGGAGATGAAGAAGTGGTTGGGGGACATGAACTTGAACGTGATTCTGAGGATGATTGCTGGGAAGAGATACGGTGGTGTTGATGATGAGGAGGTGAGGAAGGTGAGGAGGGTTTTCAGGGAGTGGTTTCGTTTGACGGGGTTGTTTGTGGTTGGGGATGCGATTCCGGTGCTTGCGTGGCTTGACTTGGGAGGGCATGTGAAGGAGATGAAGAAAACGGCGGTGGAAATGGATAGTGTGATTTGTGAGTGGTTGGAGGAGCATCGCCGGCGGAGAAGAGATGTTTCAGGGGAGAGTGAAACAGAGCAGCAGGATTTCATTGATGTTCTGTTGTCTGTACTTGACGGCATTGATCTTGGTGGTTATGATGCTGACACTGTCAACAAAGCCACCTGCTTGACGCTAATTGCAGGGGCAACAGACACCACAACAGTTACAATGACATGGGCACTCTCCTTATTGCTAAACAATCCTCACACTTTGAAGAACGTTCAAAAGGAGCTAGACGAACACGTAGGAAATCAAAGACCAGTAAACGAATCAGACATCTACAACCTACCCTACCTCCAAGCAGTAGTCAAAGAAACACTGCGATTATACCCAGCTGGCCCCCTCGCTGGAGCGCGTCAATTCACAGAGGACTGCACCTTAGGCGGCTACCACATCCAAGCAGACACAAGATTGATCCTAAACCTCTGGAAGATGCACAGAGACCCGCGCGTGTGGGAAGATCCTCTAGAGTTTCAACCGGAGAGGTTTCTGAGTAGCCGCCACAAGGGTGTGGATGTGAAGGGTCAGCATTTTGAGCTGCTTCCGTTTGGTGGTGGAAGAAGGTCATGTCCTGGCATATCGTTTGGCCTTCAAATGACGCAGTTGGCTCTTGCTGGTTTTTTGCAGGCGTTTGAGGTTGCGACCCCGTTGAATGAGGAGGTTGATATGAGTGCCACGTTTGGACTCACTAATATTAAGACCACTCCGCTTGAGGTTGTGGTTAAACCTCGTTTACACTCTCACCTCCTCTTTGGCAATCAACATCAGCCAAATCCACTGCATTAG 1596 0.5138 MELNTEYLYTALASVVSILLISYYYAHVTKSTKTKPPLAAGGWPLIGHLHLLGGSRHPPYITLGDLADKHGPIFSIRFGVHPAVVVSTWELAKEIFTSLDVIVSDRPKYTAAKILGHDYANFGFCPYGEYWRVMRKLTASELLATRRFDSLREIRDYEVRSAVEELLLRARSSPRDSSVVVEMKKWLGDMNLNVILRMIAGKRYGGVDDEEVRKVRRVFREWFRLTGLFVVGDAIPVLAWLDLGGHVKEMKKTAVEMDSVICEWLEEHRRRRRDVSGESETEQQDFIDVLLSVLDGIDLGGYDADTVNKATCLTLIAGATDTTTVTMTWALSLLLNNPHTLKNVQKELDEHVGNQRPVNESDIYNLPYLQAVVKETLRLYPAGPLAGARQFTEDCTLGGYHIQADTRLILNLWKMHRDPRVWEDPLEFQPERFLSSRHKGVDVKGQHFELLPFGGGRRSCPGISFGLQMTQLALAGFLQAFEVATPLNEEVDMSATFGLTNIKTTPLEVVVKPRLHSHLLFGNQHQPNPLH* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1821 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lja6g1821 531 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 519 - -
Lja6g1821 531 Pfam Cytochrome P450 40 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 SUPERFAMILY Cytochrome P450 42 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PANTHER CYTOCHROME P450 82C3-RELATED 13 519 - -
Lja6g1821 531 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1821 531 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1821 Lja-Chr6 45517939 45521730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1821 37 520 Cytochrome P450 AT4G31940 48.682 2.06e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1821 - - gmx:100810391 718.768