Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1818 ATGGAAAGTTCCAACAACAAGAGAGTGGAGAAAAGAGGACATGATCAGGTGGAGGAGGGTGATGGTGCACAGAACCATCTGACTCAGTCAAAGAAGCCAAAACTACCTGGTTTAGCAAGTGTAATCGTGGAAGCTTTAAAGGTGGACAGTATGCAGAGACTATGCTCATCTTTGGAACCTCTTCTCAGAAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGACGAAATTGGGGCATGCTAAATTGACTGAAAGATCTCCACCACCAAGAATAGAAGGACCAGGGACAAAGAGCCTGCAGCTTCATTTCAGGACAAGAATGCCACCTCACTTGTTCACCGGGGGAAAGGTCGAAGGAGAGCAAGGAGCATCTATCCATGTTGTCTTGCTTGACCCGAACACAGGTAATGTTGTTGAAGTTGGACCAGAGTCAGTTGCTAAATTGAACGTCGTGGTACTTGAAGGTGACTTCAATGAGGAAGCAGATGAAGATTGGACAAAAGAGCACTTTGAGAACCATGAAGTAAAGGAGCGTGAGGGGAAAAGGCCACTTCTAACTGGAGAGTTGCAAGTTAGCCTAAAGGAAGGGGTAGGAACCTTAAGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGAAGCAGGAAATTCAGGCTTGGTGTTAAGGTGGCTCCTGGGTATTGTGAGGGGATTCGTGTGCGCGAGGGAAAGACTGAAGCCTTTGCTGTTAAAGATCATAGAGGAGAATTGTACAAGAAACACTATCCACCTGCTTTGCATGATGAGGTTTGGAGATTGGACCGGATAGCGAAGGATGGAGCACTACACAAAAAATTGATTCAAGCAAAAATAGTATCTGTAGAAGATTTCCTACGTCTTCTTGTCCGTGAGCCACAGAAGTTAAGAAGTATACTTGGTAGTGGAATGTCCAACAGGATGTGGGAGAATACCGTGGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTCTTTGTTTACTACACTGGAGAAACCAATAGCAGTGGCATTGTGTTCAACAATATATATGAGCTAAGAGGCCTCATTTCTGAGGGGCAATTCTTCTCTCTGGAATCACTTACTCCAAATCAGAAGATGTCAGTGGATTCCTTGGTGAAGAAAGCATATGATAATTGGGACCAAGTTATAGAATATGATGGAAAAGTTTTAAACTCTCTCACCAACTCCAAAAAGGGATCAAGATCTGTAGCAGCTCATATAATGCCTCCCAGCAATTTCCTAGAGCAGCAATATACTTCTACAAAGAACAAAGTTTCATCTGTCTCCTCTGAACCAAATCAACATTTGCAAATAGCAAATAACTATTCACCTGATTTGAGTGATTATTCATTTGGGAGATCTGATAATCAGATGGTAGCAGCAACATCATTCAACTCTCAAATAACAAATAACTACATGTCCGGTGAAAATCCTGAAAATGAAGGTGGTGCTTATTATTCTGGAGATTGGTCTAGGCAGAGAAATGGACAAGGGTTGGAAGACATTGTAGCGGAAGAACTCCGGCTTCGGAGTTCCCAGATGTTGGAGAGTGATGATATGCAGAGACTTCTTCACACAATTAACACAGGAGTCAGCATGTCAAGTAATTTTGGTAATTCTAATGAGGGTTGTTACACCTACAGCCTTCAGTATCAGCCCCAGATGTATGATTCATTCAGTGAGGATCATGGGAAGCCTTCAGGGAAAGCTGTTGTTGGGTGGTTGAAGCTCAAAGCTGCTTTAAGGTGGGGCATATTCATCAGAAAAAGAGCGGCAGAAAGGAGAGCTCAACTTACCGAGTTGAATTGA 1827 0.4308 MESSNNKRVEKRGHDQVEEGDGAQNHLTQSKKPKLPGLASVIVEALKVDSMQRLCSSLEPLLRKIVSEEVERALTKLGHAKLTERSPPPRIEGPGTKSLQLHFRTRMPPHLFTGGKVEGEQGASIHVVLLDPNTGNVVEVGPESVAKLNVVVLEGDFNEEADEDWTKEHFENHEVKEREGKRPLLTGELQVSLKEGVGTLSDLTFTDNSSWIRSRKFRLGVKVAPGYCEGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKIVSVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYTGETNSSGIVFNNIYELRGLISEGQFFSLESLTPNQKMSVDSLVKKAYDNWDQVIEYDGKVLNSLTNSKKGSRSVAAHIMPPSNFLEQQYTSTKNKVSSVSSEPNQHLQIANNYSPDLSDYSFGRSDNQMVAATSFNSQITNNYMSGENPENEGGAYYSGDWSRQRNGQGLEDIVAEELRLRSSQMLESDDMQRLLHTINTGVSMSSNFGNSNEGCYTYSLQYQPQMYDSFSEDHGKPSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLTELN* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1818 608 PANTHER OS02G0562300 PROTEIN 9 480 - -
Lja6g1818 608 PANTHER OS02G0177800 PROTEIN 9 480 IPR012416 GO:0005516
Lja6g1818 608 PANTHER OS02G0177800 PROTEIN 496 607 IPR012416 GO:0005516
Lja6g1818 608 PANTHER OS02G0562300 PROTEIN 496 607 - -
Lja6g1818 608 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Lja6g1818 608 MobiDBLite consensus disorder prediction 1 21 - -
Lja6g1818 608 MobiDBLite consensus disorder prediction 1 32 - -
Lja6g1818 608 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Lja6g1818 608 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Lja6g1818 608 Coils Coil 595 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1818 Lja-Chr6 45485512 45490464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1818 1 608 Calmodulin-binding Proteins AT2G24300 61.514 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1818 - - gmx:100775528 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1818 6 45485512 45490464 Lja6g1818 6 45485512 45490464 ECH