Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1793 ATGATACTGTCATTCTCATTTCTTCAGTACTTGGTACTAGCTCTTCCTCCTCTGTTGCTATTCTTCATTATCCTGTTGAAGAAGAACAAATCCAATAACAAGAAACTTCCACTTCCGCCAGGTCCAAGAGGCCTTCCTATCATTGGTAACCTTCATCAACTTGACAGTTTAAATTTCCATTTTCAACTCTGGAACCTCTCAAAGATCTATGGTCCAATTTTTTCCCTTCGATTCGGCATCAAGAAAGCCATCATTATTTCCACACCAAAAATGGCCCAAAAGATCCTCAATGACCATGATCTTGCTGTTTGCACCAGAGCTCCCACACTTAGCCAGAAAAGAATTTCTTACAATGCCATGGACATGAATTTTTCCCCATACAATGATTACTGGAGAGAAATCAGAAAAATTGCTGCCATCCATTTCTTCAGCGCCAAAAAGGTCTCTAGCTTTTCCCATGTAAGAAAATCTGAGGTCAAGCAAATGATTCAAAAGATATCTAGCCATATTTCTTCTTCCAAAGTCACAAACTTGAGTGAGATCATAATGTCTGTCGCAAGCTGTACTATTTCCAGGATTGCTTTTGGGAGAATCTATGATGAGGATGGAGCTGAAAACAGCATCTTCCACAACCTTCTTGTTCAGGGACAAGCCATGTTTCTAACCTTCTTCTTTTCAGATTATATTCCTTTCATGGGGTGGATTGATAAACTCACAGGCTCACTCGCTCGTCTTGATAAAACTATCAACTCGTTCGATGCCTTTTTCCAACAAGTCCTTGATGAGCACCTCGATCCAAATAGGATCAAAGATCAAACCCAGCAGGATGATATAGTTGATACGCTACTCCAGCTTAGAGACCAGGGTTCCCTCTCAATTGATCTCACCGATGAACACATTAAAGCTTTCATGATGGACCTTCTTATAGGATCAACTGACACGAGTGTAGCCGCATCAGTTTGGCTCATGACTGGATTAATGAAGAACCCGACAGCAATGAAGAAAGTCCAAGATGAAATAAGAAATCTCTGTGGCAACAAAGACTTCATTGATGAAGTGGATATTCAAAAACTCGAATATTTGAAGGCAGTTATAAAAGAGACACTCAGATTTTATCCGCCGGCACCGCTAATACCAAGAGAAACAATGAAAAGCATCATCGTAGATGGGTATGAAATACCGGCCAAGACAATAGTTTATGTGAACGTTTGGGCCATCCATAGGGACCCTGAGGCTTGGAAAGACCCACATGAGTTTAATCCCGACCGATTCTTAAACAAGGACATAGAGTTTAAGGGACGAGATTTCGAGCTAATTCCGTTCGGTGCCGGGCGTAGAGTTTGCCCTGGCATGCCCCAAGGAATCGCCACATTGGAACTCATAACTGCAAACCTACTAAATTCATTTGATTGGGAAACACCTCTTGGGATGACACGCGAAGATATTGATGAGGAAGGGCTACAAGGACTCGCCCGACATAAAAAGGATCACCTTTGCCTTGTTGCCAAAAACCGCACGTGA 1521 0.4201 MILSFSFLQYLVLALPPLLLFFIILLKKNKSNNKKLPLPPGPRGLPIIGNLHQLDSLNFHFQLWNLSKIYGPIFSLRFGIKKAIIISTPKMAQKILNDHDLAVCTRAPTLSQKRISYNAMDMNFSPYNDYWREIRKIAAIHFFSAKKVSSFSHVRKSEVKQMIQKISSHISSSKVTNLSEIIMSVASCTISRIAFGRIYDEDGAENSIFHNLLVQGQAMFLTFFFSDYIPFMGWIDKLTGSLARLDKTINSFDAFFQQVLDEHLDPNRIKDQTQQDDIVDTLLQLRDQGSLSIDLTDEHIKAFMMDLLIGSTDTSVAASVWLMTGLMKNPTAMKKVQDEIRNLCGNKDFIDEVDIQKLEYLKAVIKETLRFYPPAPLIPRETMKSIIVDGYEIPAKTIVYVNVWAIHRDPEAWKDPHEFNPDRFLNKDIEFKGRDFELIPFGAGRRVCPGMPQGIATLELITANLLNSFDWETPLGMTREDIDEEGLQGLARHKKDHLCLVAKNRT* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1793 506 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lja6g1793 506 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 Pfam Cytochrome P450 39 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1793 506 PANTHER CYTOCHROME P450 71B11-RELATED 11 504 - -
Lja6g1793 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1793 Lja-Chr6 45212659 45214562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1793 31 501 Cytochrome P450 AT4G31500 45.895 1.74e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1793 - - lja:Lj6g3v1138550.1 726.472