Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1783 ATGCCTAATCGCTGTGAAATATGCTGTGAAATCATGATAGCTGTCTTACTCCCTCCAGTAGGAGTTTGCTTCCGCCACGGTTGCTGCAGTGTTGAATTCATCATCTGCTTGCTACTGACTATACTGGGATACATTCCAGGAATAATTTATGCCCTGTATGCTATTGTCTACGTTGATCAGGATCAGTATTTTGATGAATATAGGCGTCCCCTGTATGCTGCTTAA 225 0.4267 MPNRCEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIVYVDQDQYFDEYRRPLYAA* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1783 74 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016021
Lja6g1783 74 PANTHER BNAA03G50460D PROTEIN 1 74 - -
Lja6g1783 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 74 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1783 Lja-Chr6 45115809 45116860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1783 1 74 RCI2 Gene Family AT4G28088 78.378 6.81e-41 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1783 - - gmx:100306426 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1783 6 45115809 45116860 Lja6g1783 6 45115809 45116860 ECH