Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1781 ATGCAGCAAGGTGATCAAACTGTCCTTAGCTTGAGGCCTGGTGGTGGACGTGGCGCTGGAACCAGGCTTCTCTCATCATCTCCCTCCGATCTTCCTTTGTTCCGCTCCCATGGCGCCGCTCTTGCTTCTTTCTCTCTCAAGACTGGAGATTCACGGTTTGAAGGTCGTGAGCGCGTGCGATACACCAGAGATCAGCTTTTAGAGCTTAGAGAGGTTGTTGAGGTCCCTGATGCTATTCTAAAGGCTAAACAGCATATAGAAGCGGAGCTTCTTGGTGAAGATCAAAGTTGGAGCCGTACTGAAAGCAATCCTCCACCTCAATCACAAAATCGATATTCTGAGCCAGATAGCCGTGACTGGCGTGGTCGTACTGGACAACTTCCGCCTAATCCAGATGATAGATCTTGGGAAAATCTCAGAAAGCATGATGCTAGTCAGGTTAATCGCCAAGACCAACTCAATTCCCAGTTTGCGAGGGCACAAATCTCTTCTAACCAAGGGGGAGGATCTAACACTCTAGCTAAGGCGGAGGTTCCGTGGTCAGTTAGGAGAGAAACTCTCTCTGAAAAGGATCGTGTCTTGAAGACTGTAAAAGGAATACTAAATAAGCTAACTCCGGAGAAGTTTGATCTCTTGAAGGGCCAGTTAATTGATTCTGGCATTACATCAGCTGACATCTTGAAGGGTGTCATTTCGCTTATATTTGATAAGGCTGTTTTAGAACCAACATTTTGCCCTATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTTCAATCATTCCCATCTGAAGAACCTGGTGGAAAAGAAATCACTTTTAAGCGAGTACTTTTGAATATTTGCCAGGAGGCTTTTGAAGGTTCTTATAATCTGAGGGAGGAAGTAAAACAGATGACTGCTCCTGAGCAGGAGATGGAGCGTACAGACAAGGAAAGACTGATCAAGCTTCGTACCCTTGGAAATATACGTTTAATTGGTGAGCTTTTGAAGCAGAGGATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGACCCCCAGACAGCAATTCTTGTCCAGTTGAGGAAAATGTTGAAGCCATATGCCAATTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCTTAAATCGCGGCGAATAAATGATTTGTATTTTAGCCGATTGAAAGAACTGAGCAAAAACCCCCAACTTGTCGCACGGCTAAGGTTTATGGTTCGCAATGTTTTAGATTTGCGTGCCAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCTAAAACCATTACTGAAATTCACTCAGAGGCTGAAAAACATCTTGGATTGCGTCCAGGTGCTACTGCTAGCATGAGAAATGCCCGTGGAGGGGTTCAAGGAAACGTCGGCCCTGGGGGCTTCCCCATTGCTCGACTCGGTACCGGGGGTATGATGCCTGGAACGCCTGGAATGCCAGTGACCAGGAAAATGCCTGGGAGTTCTGCAATTGATAATGACAACTGGGAGGTTCAGAGGACTAGATCTATGCCAAGAGGGGACTCGTCAGGTACTCAAGCTGCAGGACGCAACAACTCGGCTTTACTTTCAAAGCCCCCAACCCTGAATTCAAAATTGCTTCCTCAAGGTAGTAGTGGTATAATAAGTGGAAGTAGTGCTCTAGTACATGGAGGTGGTCCACTTACTGCTCGCCCGTCAAACTTTGGTTTAGGTTCTGAGGCTGCACCTGAAGTCTCTTCACCTGTTAAACCAGTTTCAGCTGTGCCCTCTGTGAAGCCGCAGGCTCCAGCTGTGAAACTGAATCATGAAGATCTTAATCGCAGAACCGTCTCTCTTCTGGAAGAGTACTTCAGTGTTAGGATTTTGGAAGAGGCATCACTGTGTGTGGGGGAGTTAAAATCTCCATCTTACCACCCTGAGGTTGTTAAGACAGCCATTTCCCTTGCACTTGATAAAAGTCCACCATGTGTTGACCCGGTTGCCAATCTTCTCGAGTATCTATTCATCAAGAAGATACTTACAAATGGAGACATAGGGAGTGGCTGTTTGTCATTTGGTTCTCAGCTGGATGACATTGGCATAGATTTACCCAAAGCACCGAGTAATTTTGGTGAGATCATAGGGAAAGTAATTTTGGCTGGGGGGTTGGATTTTAAGGTGGTGAAAGAGATTCTTCAGAAGATGGATGATGACCTGTTCCAGAGAGCAGTGTTTGACAGTGCAGTTGGGGTCATTAGTTCTGCATCTGGGCAAGCTGTATTGGAGTCTCAAAAATCTGATATTGAGGCCTGCCAGAGTCTGCTCAAGTAA 2316 0.4568 MQQGDQTVLSLRPGGGRGAGTRLLSSSPSDLPLFRSHGAALASFSLKTGDSRFEGRERVRYTRDQLLELREVVEVPDAILKAKQHIEAELLGEDQSWSRTESNPPPQSQNRYSEPDSRDWRGRTGQLPPNPDDRSWENLRKHDASQVNRQDQLNSQFARAQISSNQGGGSNTLAKAEVPWSVRRETLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLQSFPSEEPGGKEITFKRVLLNICQEAFEGSYNLREEVKQMTAPEQEMERTDKERLIKLRTLGNIRLIGELLKQRMVPEKIVHHIVQELLGPPDSNSCPVEENVEAICQFFNTIGKQLDESLKSRRINDLYFSRLKELSKNPQLVARLRFMVRNVLDLRANNWVPRREEVKAKTITEIHSEAEKHLGLRPGATASMRNARGGVQGNVGPGGFPIARLGTGGMMPGTPGMPVTRKMPGSSAIDNDNWEVQRTRSMPRGDSSGTQAAGRNNSALLSKPPTLNSKLLPQGSSGIISGSSALVHGGGPLTARPSNFGLGSEAAPEVSSPVKPVSAVPSVKPQAPAVKLNHEDLNRRTVSLLEEYFSVRILEEASLCVGELKSPSYHPEVVKTAISLALDKSPPCVDPVANLLEYLFIKKILTNGDIGSGCLSFGSQLDDIGIDLPKAPSNFGEIIGKVILAGGLDFKVVKEILQKMDDDLFQRAVFDSAVGVISSASGQAVLESQKSDIEACQSLLK* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1781 771 MobiDBLite consensus disorder prediction 509 544 - -
Lja6g1781 771 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 770 - -
Lja6g1781 771 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 770 IPR045208 GO:0003743
Lja6g1781 771 Pfam MA3 domain 609 719 IPR003891 -
Lja6g1781 771 MobiDBLite consensus disorder prediction 95 113 - -
Lja6g1781 771 MobiDBLite consensus disorder prediction 93 137 - -
Lja6g1781 771 SUPERFAMILY ARM repeat 186 423 IPR016024 -
Lja6g1781 771 SMART ma3_7 607 719 IPR003891 -
Lja6g1781 771 Gene3D - 185 421 - -
Lja6g1781 771 SMART if4_15 194 420 IPR003890 GO:0003723|GO:0005515
Lja6g1781 771 MobiDBLite consensus disorder prediction 1 31 - -
Lja6g1781 771 Pfam MIF4G domain 194 420 IPR003890 GO:0003723|GO:0005515
Lja6g1781 771 Gene3D - 600 767 - -
Lja6g1781 771 SUPERFAMILY ARM repeat 602 746 IPR016024 -
Lja6g1781 771 ProSiteProfiles MI domain profile. 606 728 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1781 Lja-Chr6 45076640 45088339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1781 1 769 Eukaryotic Initiation Factors Gene Family AT5G57870 63.464 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1781 K03260 - gmx:100800438 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1781 6 45076640 45088339 Lja6g1781 6 45076640 45088339 ECH