Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1757 ATGTGTGTGTGTGAGACATCAACAAAGAAAAGCAACTTCGTACATAAGAGAATTGCTTTTACCTTCTACTTTGATGTGCTTCCCTTGTTCCATTCTGCTCACTGTCATTGTTCCATAATCATGGCTTCCAATCAAGTTCTCGTCCTCCTCTTCTTCCTCTTCTTCTTCCTCTCTCGTGCACCTCTTTCTTCTTCTTCAGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGTGTCAGAGCTGAACTGAATGATCCTCATGGTGTGCTCAACAACTGGGATGAGTTCTCTGTTGACCCTTGCAGCTGGGCCATGATCACTTGCTCCTCTGATTACCATGTTATAGGCCTGGGAGCACCTAGTCAATCTCTCTCTGGTACTTTGTCTCCAGCAATTAGAAACCTTACCAATCTTCAACAAGTGTTGCTGCAGAACAATGACATCTCTGGCAAAATACCACTAGAGCTTGGTTTGCTTCCCAGGCTTGAGACTCTAGATCTTTCCAATAACAGGTTCTCTGGGGTGATTCCAGGGTCTCTTGGTCAGTTGAATAGTCTCCAATATCTGAGGCTGAACAACAATAGCTTATCTGGACCCTTTCCTGTGTCATTAGCCAAAATCCCAGAACTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCCTTGCCTAAGCTTCCAGCTAGATCATTTAATGTTGTAGGAAACCCATTAATTTGTGGAAGCAGCTCCACTGAAGGTTGTTCTGGTTCAGCAACATTTCTACCTGTTTCAATTTCTCTAGCATCATCTCAAGGGAAATACAAGTCCAAGAAACTAGCACTGGTTCTTGGGATTAGCCTTAGTAGTGTTTGTCTCGTCTTCCTGTTTTTGGGGCTTTTCTGGTATAGAAAGAAATGGCAGAACCAAGCAATCCTGTACCTTGGTGATTATCATCTGGAGGAGGAACTTGTTAGCTTGGGAAATCTGAAAAAATTCACTTTCAGAGAGCTCCAAAATGCAACAGATGCTTTCAGCTCCAAGAACTTACTTGGTGCTGGAGGCTTTGGCAATGTTTATAGAGGGAAACTTGGAGACGGTTCAATGGTGGCAGTAAAAAGGCTAAAGGATGTGACTGGAAGTGCTGGTGAATTACAATTCCGAACAGAAATGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATTGGATATTGCGCTTCTCCTAATGAAAAGCTTCTGGTTTATCCTTTTATGTCCAATGGCAGTGTGGCCACCAGGCTTAAAGGCAAACCCGCTTTAGACTGGAATACAAGAAAGAGAATAGCAATTGGAGCTGCCAGAGGTCTACTCTATCTACATGAGCAGTGTGATCCTAAGATAATACACAGAGATGTGAAGGCTGCAAATGTGCTTGTGGATGAATATTTTGAAGCTGTTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGACCATGCTGACTCCCATGTCACCACCGCTGTCCGCGGAACTGTCGGGCACATAGCACCAGAGTACCTCTCCACTGGTCAATCGTCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACAGCTCTCGAGTTTGGAAAAACACTGAATCAGAAAGGAGCAATGCTAGAGTGGGTGAGGAAAATACAGCATGAAAAGAAAGTAGAACTGTTGGTGGACAAGGAACTAGGGAGCAACTATGACAGGATTGAAGTTGGGGAAATGCTGCAAGTAGCTCTACTCTGCACTCAATGTTTACCAGCCCTTCGTCCCAAAATGTCTGAAGTGGTCCGAATGCTTGAAGGCGATGGTCTTGCTGAGAAGTGGGCAGCATCACATACTAATCATGGCAGTCTCAGTCTAAACAACACCCTCCACAGCAATTGCAGCAAAAGCTCATCTCATCATTCCAATGCTTCAAACCATGATGACAACAATAAAGCTCATTATGATCGTTCCAGCACGTTTGGCATGACAATGGATGATGATGATGGTGATGAACATTCTTTGGATTCCTATGCTATGGAACTCTCTGGTCCTAGGTAA 2070 0.4401 MCVCETSTKKSNFVHKRIAFTFYFDVLPLFHSAHCHCSIIMASNQVLVLLFFLFFFLSRAPLSSSSEPRNHEVEALMSVRAELNDPHGVLNNWDEFSVDPCSWAMITCSSDYHVIGLGAPSQSLSGTLSPAIRNLTNLQQVLLQNNDISGKIPLELGLLPRLETLDLSNNRFSGVIPGSLGQLNSLQYLRLNNNSLSGPFPVSLAKIPELAFLDLSYNNLSGPLPKLPARSFNVVGNPLICGSSSTEGCSGSATFLPVSISLASSQGKYKSKKLALVLGISLSSVCLVFLFLGLFWYRKKWQNQAILYLGDYHLEEELVSLGNLKKFTFRELQNATDAFSSKNLLGAGGFGNVYRGKLGDGSMVAVKRLKDVTGSAGELQFRTEMEMISLAVHRNLLRLIGYCASPNEKLLVYPFMSNGSVATRLKGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLVDEYFEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTLNQKGAMLEWVRKIQHEKKVELLVDKELGSNYDRIEVGEMLQVALLCTQCLPALRPKMSEVVRMLEGDGLAEKWAASHTNHGSLSLNNTLHSNCSKSSSHHSNASNHDDNNKAHYDRSSTFGMTMDDDDGDEHSLDSYAMELSGPR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1757 689 MobiDBLite consensus disorder prediction 645 671 - -
Lja6g1757 689 MobiDBLite consensus disorder prediction 635 689 - -
Lja6g1757 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Lja6g1757 689 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Lja6g1757 689 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 48 689 - -
Lja6g1757 689 SMART LRR_typ_2 159 182 IPR003591 -
Lja6g1757 689 SMART LRR_typ_2 183 214 IPR003591 -
Lja6g1757 689 Gene3D Ribonuclease Inhibitor 69 251 IPR032675 -
Lja6g1757 689 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 48 689 - -
Lja6g1757 689 SUPERFAMILY Protein kinase-like (PK-like) 318 609 IPR011009 -
Lja6g1757 689 SMART serkin_6 339 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1757 689 Pfam Leucine rich repeat N-terminal domain 70 109 IPR013210 -
Lja6g1757 689 PRINTS Leucine-rich repeat signature 207 220 - -
Lja6g1757 689 PRINTS Leucine-rich repeat signature 162 175 - -
Lja6g1757 689 ProSiteProfiles Protein kinase domain profile. 339 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1757 689 Gene3D Transferase(Phosphotransferase) domain 1 416 626 - -
Lja6g1757 689 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lja6g1757 689 Pfam Leucine rich repeat 160 220 IPR001611 GO:0005515
Lja6g1757 689 SUPERFAMILY L domain-like 69 240 - -
Lja6g1757 689 Pfam Protein kinase domain 340 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1757 Lja-Chr6 44757199 44762418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1757 39 689 Receptor kinase-like Gene Family AT5G16000 61.608 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lja6g1757 Pkinase 6.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1757 - - lja:Lj6g3v1048910.1 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1757 6 44757199 44762418 Lja6g1757 6 44757199 44762418 ECH