Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1749 ATGGAGTTGAAAAAGGACAAGCTTGTCAGAATTTATGATTTTAGATTCTACTCGGATGGCAAGAAGCATAAAGAGCCACTATGGAGAGCAGCTGAACCGCCGGGGCTTGAAAGGTCATCGTCCAGATACAAGGTTCCGTCGTCTTCTTTGCTTAAAACGAGCAATGCTGTTCCATTAGGGAAAACTAGAATTGGAGGACCTAAGGTATTCCCGGAGGATCATGAGCCGTGGCGAAAAAGAATACTTGACCCGGGTAGCGAGATTGTGTTAAAATGGAACCGGGTCTTCATTGTTTCATGCTTGGTGGCTCTTTTTGTTGATCCGTTGTACTTTTATTTGCCCAGTGTAACAGACAGCTCAAGGTCTTCATGTATGAGGACGGACCTAACATTACGGATTATTGTGACCTTTCTTCGCACTATAGCAGATATTTTTTATCTGTTACACATGATAATTAAGTTCAGGACAGCTTATGTGGCCCCAAGCTCACGGGTATTTGGCAGGGGTGAACTTGTCATGGACCCAAAGAAAATCGCAAGGAAATATATCAGATCTGATTTCTTCATTGATTTAATTGCCACACTACCTCTACCACAGATGGTCATATGGTTTATTATACCGGCAACAAGAAGCCCTCAGAGATATCACAATAATAATGCTCTTGCATTGATTGTTTTGCTCCAATATGTTCCAAGGTTATATTTGATGTTTCCACTAAGTTCTCAAATAATCAAAGCAACCGGAGTGGTTACAAAGACTGCCTGGGCAGGAGCTGCGTATAATCTGCTATTGTACATGTTGGCTAGTCATGTTTTAGGGGCAGCTTGGTATCTTCTTTCTGTGGACCGATATACTCATTGTTGGAAATCCTTTTGCAAAAAGGAAACCAGCCCTGAGAATTGCTTTCGTTACCTGGACTGCAATTATGTTAATCTTCTGCAGCGCGAGATATGGGCAAACAGTACAAATGTATTTAACAGCTGTGATCCCAGTAGTAAAGATAATGACTTTAAGTTTGGGATATTTGAAAATGCAGTAAAGAAGCACGTTGTGTCTACAGACTTTATCCCGAAATACTTGTATTGTTTATGGTGGGGATTGCAGCAATTAAGTTCTTATGGACAGAACTTAGACACAAGCACTTTTATTGGAGAAACATCATTTGCCATTGTCATTGCCATCCTTGGTCTTGTACTATTTTCTCATTTGATTGGGAACATGCAGACATATTTGCAATCAATTACTATAAGGCTTGAAGAGTGGAGGCTTAAGCGAAGAGACACAGAGGAGTGGATGAGGCATCGCCAACTCCCTGAAGATTTGAGATTCCGTGTTAGACGATTCGTTCAATATAAATGGCTTGCAACTCGTGGTGTTGATGAAGAAACCATTCTACGTGCATTGCCTGCTGATCTTCGCCGCGATATTCAACGCCACCTGTGCTTAGACCTTGTTAGACGAGTTCCCTTCTTCTCACAAATGGATGATCAGCTTCTTGATGCAATTTGTGAGCGGCTGATATCTTCTCTAAGCACTCAAGGCACCTACATTGTTCGCGAAGGAGACCCTGTAACTGAAATGCTCTTCATTATTAGAGGTAGACTTGATAGTTCCACAACAAATGGTGGTCGGAGTGGTTTCTTCAACTCTATCATATTGAGACCGGGAGATTTTTGTGGTGAGGAACTACTTTCTTGGGCTTTACTCCCAAAATCAACAGTAAATTTGCCTTCTTCAACCAGGACAGTTAAAGCCCTGAGTGAGGTTGAAGCTTTTGCTCTTCGGGCTGAAGACCTCAAGTTTGTCGCCAACCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACATTTAGATTTTACTCCCACCATTGGAGGACTTGGGCAGCCTGTTTTATTCAGGCCGCTTGGCGTCGATACAAGAAAAGGATATCTGTCAAAGACCTCAGTTTGAGGGAACCCCTTCCCTTGGATGAGACCGTGGCCAGTGAGAGAGAACATGAAGAGGAAAGGCCTGCTGGTTCAAACACATCTCAGACTAAGTTGAACCTTGGGGTCACAATTCTTGCTTCAAGGTTTGCCGCTAACACACGAAGAGGAGCTCTGAAGATTAAAGATGACCTGCCTAAGTTACGGAAGCCTGAAGAACCTGACTTCTCCACTGAAGCTGATGATGACTAG 2181 0.4305 MELKKDKLVRIYDFRFYSDGKKHKEPLWRAAEPPGLERSSSRYKVPSSSLLKTSNAVPLGKTRIGGPKVFPEDHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFVDPLYFYLPSVTDSSRSSCMRTDLTLRIIVTFLRTIADIFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKKIARKYIRSDFFIDLIATLPLPQMVIWFIIPATRSPQRYHNNNALALIVLLQYVPRLYLMFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTHCWKSFCKKETSPENCFRYLDCNYVNLLQREIWANSTNVFNSCDPSSKDNDFKFGIFENAVKKHVVSTDFIPKYLYCLWWGLQQLSSYGQNLDTSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLRFRVRRFVQYKWLATRGVDEETILRALPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLISSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLSWALLPKSTVNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRISVKDLSLREPLPLDETVASEREHEEERPAGSNTSQTKLNLGVTILASRFAANTRRGALKIKDDLPKLRKPEEPDFSTEADDD* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1749 726 MobiDBLite consensus disorder prediction 660 679 - -
Lja6g1749 726 Pfam Ion transport protein 92 416 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lja6g1749 726 Gene3D Helix hairpin bin 418 481 - -
Lja6g1749 726 MobiDBLite consensus disorder prediction 660 674 - -
Lja6g1749 726 Gene3D Jelly Rolls 488 608 IPR014710 -
Lja6g1749 726 Pfam Cyclic nucleotide-binding domain 513 601 IPR000595 -
Lja6g1749 726 PRINTS EAG/ELK/ERG potassium channel family signature 453 460 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g1749 726 PRINTS EAG/ELK/ERG potassium channel family signature 150 159 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g1749 726 PRINTS EAG/ELK/ERG potassium channel family signature 385 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g1749 726 PRINTS EAG/ELK/ERG potassium channel family signature 267 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g1749 726 PRINTS EAG/ELK/ERG potassium channel family signature 403 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja6g1749 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 58 723 - -
Lja6g1749 726 SUPERFAMILY Voltage-gated potassium channels 86 412 - -
Lja6g1749 726 ProSiteProfiles cAMP/cGMP binding motif profile. 490 620 IPR000595 -
Lja6g1749 726 CDD CAP_ED 490 621 IPR000595 -
Lja6g1749 726 SUPERFAMILY cAMP-binding domain-like 420 612 IPR018490 -
Lja6g1749 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 723 - -
Lja6g1749 726 SMART cnmp_10 490 621 IPR000595 -
Lja6g1749 726 MobiDBLite consensus disorder prediction 704 726 - -
Lja6g1749 726 MobiDBLite consensus disorder prediction 704 719 - -
Lja6g1749 726 Gene3D - 95 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1749 Lja-Chr6 44643740 44653047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1749 1 725 Ion Channels AT4G30360 68.989 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1749 K05391 - gmx:100810967 1264.21