Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1735 ATGGAACACCCCAGATTAGGGTTCCCCATTACTCTTCTCTTATTCTCCTTCATCTTGTTACCTTCCACTTCACAATCCAAATGCACACATGGCTGTGCTCTAGCTCAAGCCTCCTACTACCTATTGAATGGCTCCAATCTCACATATATTTCAGAAATTATGCAATCCTCACTTCTTACCAAGCCTGAGGACATAGTCTCCTACAACCAAGACACCATAGCTAGCAAAGACAGCGTCCAAGCTGGCCAGAGGATCAACGTTCCGTTCCCCTGCGACTGCATCGAAGGCGAGTTCTTAGGCCACACATTTCAGTATGATGTTCAGAAAGGGGACAGGTATGACACCATTGCCGGGACTAACTACGCGAATTTGACCACAGTTGAATGGTTGAGGAGGTTCAATAGCTACCCGCCGGATAATATTCCCGATACCGGAACTTTGAATGTTACGGTTAATTGTTCTTGTGGGGATAGTGGTGTGGGTGATTATGGGTTGTTTGTTACGTATCCGCTTAGGCCTGGGGAGACTTTGGGGTCTGTGGCGAGTAATGTGAAATTGGACTCCGCGTTGCTGCAGAAGTACAATCCCAATGTGAATTTCAACCAAGGAAGTGGCATTGTTTATATTCCGGCCAAAGATCAAAATGGTAGCTATGTGCTTCTGGGGTCCAGTTCAGGAGGTCTTGCTGGTGGGGCTATTGCTGGAATAGCTGCTGGAGTAGCGGTTTGTCTTCTGTTATTGGCAGGTTTTATATATGTTGGATATTTCCGGAAGAAGAGGATACAGAAGGAGGAACTTCTTTCACAAGAGACCCGTGCAATTTTTCCTCAAGACGGGAAGGATGAAAATCCCCGTAGTACTGTGAATGAAACACCGGGGCCCGGTGGCCCTGCGGCCATGGCAGGCATAACAGTGGACAAATCAGTGGAGTTCTCGTATGATGAACTAGCAACTGCTACAGATAACTTTAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGCTCTGTCTATTATGCGGAGCTGAGGGGAGAGAGAGCTGCCATCAAGAAGATGGATATGCAAGCGTCAAAAGAATTTCTCGCTGAATTGAAAGTCCTTACACGTGTTCATCATCTTAACCTGGTGCGGTTGATCGGATATAGTATCGAGGGCTCCCTTTTCCTTGTCTATGAATTCATCGAGAATGGAAACTTGAGTCAACATTTGCGTGGTTCAGGTAGAGATCCACTGCCATGGGCTACAAGGGTGCAGATTGCTTTGGATTCTGCAAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTACCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTCACAGAAGTTGGAAGTTCCTCGCTTCCCACTGGTCGTCTTGTTGGGACATTTGGATACATGCCACCGGAGTATGCTCAATATGGAGATGTCTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGACGCAATCGTCAAGACAAGCGAATCTATTACTGACTCAAAAGGCCTAGTAGCTTTGTTTGAAGGAGTTCTTAGTCAGCCGGATCCTACAGAAGATCTTCGCAAACTAGTGGATCAAAGGCTTGGCGATAACTACCCTGTTGATTCAGTTCGCAAGATGGCCCAACTAGCCAAAGCGTGCACACAGGACAATCCACAACTGCGTCCAAGTATGAGATCCATTGTGGTTGCCCTTATGACACTTTCTTCAACCACTGACGACTGGGATGTTGGCTCCTTCTACGAAAATCAAAATCTTGTGAATCTTATGTCTGGAAGATAG 1869 0.4537 MEHPRLGFPITLLLFSFILLPSTSQSKCTHGCALAQASYYLLNGSNLTYISEIMQSSLLTKPEDIVSYNQDTIASKDSVQAGQRINVPFPCDCIEGEFLGHTFQYDVQKGDRYDTIAGTNYANLTTVEWLRRFNSYPPDNIPDTGTLNVTVNCSCGDSGVGDYGLFVTYPLRPGETLGSVASNVKLDSALLQKYNPNVNFNQGSGIVYIPAKDQNGSYVLLGSSSGGLAGGAIAGIAAGVAVCLLLLAGFIYVGYFRKKRIQKEELLSQETRAIFPQDGKDENPRSTVNETPGPGGPAAMAGITVDKSVEFSYDELATATDNFSLANKIGQGGFGSVYYAELRGERAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEFIENGNLSQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNYRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKDAIVKTSESITDSKGLVALFEGVLSQPDPTEDLRKLVDQRLGDNYPVDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1735 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Lja6g1735 622 MobiDBLite consensus disorder prediction 276 297 - -
Lja6g1735 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 622 IPR044812 GO:0019199|GO:0045087
Lja6g1735 622 Gene3D Phosphorylase Kinase; domain 1 308 393 - -
Lja6g1735 622 CDD STKc_IRAK 329 591 - -
Lja6g1735 622 SMART serkin_6 323 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1735 622 ProSiteProfiles Protein kinase domain profile. 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1735 622 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Lja6g1735 622 Pfam Protein tyrosine and serine/threonine kinase 325 593 IPR001245 GO:0004672|GO:0006468
Lja6g1735 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 11 622 - -
Lja6g1735 622 Gene3D Transferase(Phosphotransferase) domain 1 394 613 - -
Lja6g1735 622 SUPERFAMILY Protein kinase-like (PK-like) 305 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1735 Lja-Chr6 44523242 44530647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1735 9 622 Receptor kinase-like Gene Family AT3G21630 60.000 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lja6g1735 PK_Tyr_Ser-Thr 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1735 - K13429 gmx:100777781 969.533