Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1712 ATGGCAATGGATTTTGGTGTATCTCTTGGGGCTGCGATTGTGAAGGACGTGGTGTATGCAGCAACACGTCAACTTCGTTATTCCTTCTGCTTCAGCAATTTAGTTGAAGATGTTGTGAGAGAAAAAGAGAGGTTGTTATTGACAAGAAACAGTGTGCTGGACAAAGCAGAGAAAGCTAAAAAGAGAACTGAAAAGATATCCAGTGATGTTGAGCAGTGGCTCAATGATGCAAACTTGATCTTGGAAGAAGTGGAGATGCTGGAAGTGAAGGCAAAAGAAAAAAAGAGCACTTTCCTCTGTCACTGCCCCATTTGGATCTGGCGACATCGTCTAGGAAAGGAGGCAGCGAGGAAGGCAGATACCATAAGAAAGCTCGATAAAAATAGTAAGTTCAAGCAATTTTCACGCCTTGCTACACTTCCTGGCATGAAATACTATTCTTCTGAAGGTTTTATATACTTTGAGAGTACAAAGTCTACTTATGATCAAATTCTAAATGCACTTAAAGATGATGAGGTTTGCGTGATTGGAGTGTATGGCATGGGAGGAACTGGAAAAACAGCCCTGGTAAAGGAAGTAGGTAAAGAAGCTGAGCAGATCTTTGACAAAGTTGTCTTTCTTGCTGTGTCCAGTGCTATAGATGTTAGAAAAATACAAGGCAATATTGCAAGCTCACTAGGCTTTGAGTTGAAAGAAGAAGATATCTCAGAGAGAGCCAAGCGCTTGAGTATGAGATTAACTACAGGAGAAAGTATTCTCATAATTCTTGATGATGTATGGCAAATGCTTGATTTTGAAGCCATAGGGATTCCCTTTGGTAAAGATCTCGTGAGATTCAAATGCAATGTTCTCTTGACAACAAGAAGTCGACAAGTATGTTCTATGATGGATTGTCAAAAAATAGTTCCGCTATCGCTCATAGCTGAAGAAGAGGCATGGGCTCTATTCCAGAAGCATGCAGATATAACTGATAGTGCATCTGATCCCTTGAAGGGTCTGGCACAAGCAATTACAAATGAATGTAAAGGACTGCCAGTTGCAATCAAAGCTGTGGCTAGCACTTTGAAGGGCAAAAACCTGGTTGAGTGGGAGGAAGCTTTGGAAACATTAAGAGATTCTAGACCACTGGATATTGAACCTGGTCTGGAGAATCCTTATAAATGTCTGCAACTAAGTTATGATAATTTGAAGAATGAAGATGCCAAGTCACTTTTCTTGTTATGTTCCTTCTTCCCAGAAGATTCAGAAATTCCTCTTGAGATTTTAATCAGATTTGGATTTGGGCTAGGCTTGTTTGAACAAGTTAAATCATTCAAGAGGGCAAGGACTAAAGTGAGTGCAATTATTAATAAACTCATAAGCTCCGGTTTGTTGCTTCAAGCCGAAGAAAGGCCATCTGTGTTAATGCATGACTTGGTACGTGATGTAGCCTTGTGGATAGCAAAGGAAAAGGTTCATGTCATATTGGGCCCTAAGATGGATACAGAGGCATTGAGAGAGGATACAAATATAAAAGATACAGTAAGATTCTTGTATTTCTATAACATAAATGAATTTCCAGATCAATTGGATTGTCCAAATCTTGAGATTCTATACATGTACACGGAGGAAAAAGGTTCTTTTCAAGTGCCAAATTCACTTTTCAATGGGGTTAATGAGCTCAAAGTTTTGACCTTGCATTTTCATAGGCTTTTAAAGGAAACCCTGTTAAAGGAAACCCGGTGTCTATTGGGGGCTCAGGCAATCTATTGCTTAACAAATCTTCGAACCTTATGCCTAAAAGGATGCAAATTGGATAACATCTCCTTTTTGGGAAACTTAGAGAAACTTGAGACTCTTGAATTCTGTAATTGCATGATAAACGAATTGCCAAATGACACAGCAGAACTGAGGAAGTTGAGGCTGCTAGATGTATCACTATGCAGTATAGGAGGAAATCCTTATGAGGTGCTGGGAAGATGTTCACAACTAGAAGAGTTGTACTTTGTAAAAAATGATCTTTCAGAAAAGGTATTAAATGATCAAAATCTGGCCAAATTCTTTCGCAAGAGTAGCTCTTCTCACAGATTGCAAAGGTATCATGTATATATCGGAAGTGATAATTATAAATTTAAAGGTGATATGAGATCAAGATTTTTATCGATAAATCACTTTGATGTGTCCATCTCAAGTTCCACAATCAAGGATCTGATACAAAGAGCAGAAATTCTTTTTCTCAGAAAAATAAAGAGAGGTTGTAAAAATATTGCCCCTGACATTCTCCAGATTGAAGGAAAAAGTACAAATGAGTTAGTTGAGCTTCACATTGACAGTTCTGAAGAGATGGAGTACTTGATTGACACTACAGCTTTGTTTGAGGTTGGGATTGTCTTCTCCAATCTGGTTAAGCTGAGAATCTCATGGATGAAACGTTTGAAAGAATTGTTCTGCGGTCCGCCTCCTCTTGGCCTTTTTGAGAAGCTAGAAGAGCTGTGTGTTGCACAATGTAGCCAGCTGTGTAGCATATTATCTTTTTGGAAGCTGAACTTTCAAAATCTCAAGATCTTAAAATTTGAGAATTGCCCCATGTTGACATCTCTCTTCTCATCTGCTGTTACTCAAAGTTTGGGACAATTGGAAGTGCTGAAAATAAGACATTGTGATGGTCTGAAGCATATAATGACAGGTGAGGACGCAGAGATAGTTTTAGATGATAATGGTCAACAAGTTTTCAGATCAGTGTTCACAAAATTAAAACGGCTCATTGTCAAATGGTGTGGACAACTGGAGAGCTTATTCCCAGTCTCTTTTTCTAAGGGCCTTGTGCAATTGGAGTATTTAGAAATAGACAAAGCTCCTGAATTGAAATATATTTTTTACCAAAATCAGCTATCCTGTCAGAATCAAAATGAGTTACACATCATTGAGTTTCCTGTTCTAAAATTACTCAAGCTGTTGCACTTGCCAAATATCATTAACATTTGTCCAGAAAATTATCATCCAATGTGGCCGTCTTTGCAGAACTTGTATTTGCTGCAGTGTCCCCATTTAAACATCATGTCTGTCAATAATTCCATTTTTGGTTTAACAACGAGACATCAAGGTGATATAGAGGAACCGATGCCACTTGTTACACATAGCAGCCAAGTGGTTAATGGAGTTTCACCATTACTAACTCTGCAACATGTAGAAAGTCTTGTTGTTGGGTTCTGTAAAATAGAAGGCATTTTACAGCTGACAGGACTTCCCATCAATGGAGTGATAGATCAACTGACATCATGTTTACACCGTTTGTCTTTGGAGAACTTACCTGAGCTGGGCTATATATTTAGGGGTCCTTTACAAGTTTTTAGCCTTCCAAATCTTGTAGAACTATGTGTCCATGGATGCAGAAAATTAAAATATATCTTCTCATCTTGTATTGCTGGTAGCCTACCTCATTTGGAGGTGCTGGACATAAAATATTGCGATCAGTTAGAGGAAATCATTGAGGATGAAGAACAAAGGAACCACTTGAATCATTGTAAGGAATCAAATGAAGGGGAGATCACTTTGGTTTCTACCACTCTTGAGGACATGTCTCTTATCCACCAAAGTACAGGGCCATTCAATTTTCATAGTCTTAAGCAGCTGAAACTAGCTTCTTGTCCAATGTTGAGATCATTGTTCACCCCATCCACTGCCAAAACTTTGACATCATTGCAATATTTGACAATAGAAGAATGTCAACGGTTGAAATTCTTAGTAGCCGAAGAGGCAGTTCAAGAAAATAGCCCGGAGGAAATTGTTAAGGAGGATCATGAAGGGGAGAGCCATGTATTCTTCTCCAAGTTGGAAGTTCTCAGGGTTGAAAAATGTGATGCATTGGAATACATATTTCCGGTTTCTTACGCTCAAGGTCTAGTGGAATTGAAAAACATGGTAGTGAGTGAAACTCACCAGATAAAGTATATATTTGGCGAAAGTCATCACGGCGAGAACTCTTCCAGCAGAAAGAAAAACCAGATCCAAGTTCAGCTTCCTGTTTTGACGGAATTCTGTCTTAGAGGTTTACCAAGCATCATTAGCATTTGCCCAGAAAGATTTTATGTTGAATGCTTATCTTTGCGACGGTTTTCTCTGGATTCACTTGGATTACCGATCATGTCTATGAAGAATTCGATGAAATCTTCAAAAGAAATAGAGGGGGGCTGCACATCCAACCAGGTGTCACTGGAAGAAGTTCCAGATATACAGACAATTGAAAATTCTGGTAAACTTTCACTTTGTACCTGTGAAATAGAAGCTGTTTTCCAAATAGAAGGACCTTCAATCAATAAACATCAAGATTCACTGACCTTAAGCTTAAGCTACCTGGATCTGCACAGTTTACCTGAGCTAAGGCATATATGGAAGGGTCCTCAAGAACTTCTGAACCTTGAAAATCTCATGGAGTTATCTGTATTTGAGTGTGAAAAATTGAAATATATCTTCTCTTCCTCAGTCTTGAGAAGCCTTCCCCAGTTAATGTCCTTAACTATAAAACACTGTGAGCTATTGGTGCAAATTATTGAAGAAGATGAAGGTGATAGAAATACCTTAGATTGTAATTGTCAGAATGTGTGTTTCCCAAGGCTGGAAATCCTTGATATTCAGCAGTGCAATAACTTGAAATGTCTTTTCTCTATCTTCTCACCTCTTGAGCTACCTCAGCTACAGTTCCTGTTTATAGAAGATTGCTCTCTGTTGGAGAAAGTCTTTCGAGGAAAAGAATGTGAGATTGAACAAGAGCAGGTACCTTTGTTTCCAACTCTGGAGTGCCTAAGGCTCAGAAAACTGCCAAACCTCATTGATATCTGCCAAGGATTTAAACTGAAATCTGTGTATCATGAAGTTGAGGACTGTCCTAAGCTCGCTTCAGCTGCTGCTGCTACCTTAAAAATTTTACCACAAGAACACCGATATCCAGAAGAAAACAGAGAACATAAAGAAGAGGGAAAAGGAAACAAGGGAAAACAAAAACTACTAATAGAGGAAACAAATGCAGTTGATCTGACCAAGAGCTCCATAAAAATTAAGGAAGTTAATCTGGGAGATGCTAGCAGTAGTACTAGTACTCCCTCCATAGATGCAGGCTTTAACCCCAACAACAACACAACAGAGACAATTTTTTACTTGCCAAAGGTTGCTGAAGATTATATCCAAGGGCTTGGGAACAACTGCAAGACCAAGCATCTTTGTGAAGATTTCAACTGTGGAGTTGCTGTTTCAGCACTTATGGCTCCACAAGAGTTGTATACTCCTGTACCAGCAGCTCTCAATGGTCATGATCCTTCACCTGCTGTCATTCTGAATTCAGCTCCTACAGATTCCTCTCTCATAACTCCATCCACTGCTATACAGTCATCAGTTTCACTCCCAGCTGTTCATATTCCACTAACAGAAGTTGATCAACTGGAGATTACTCCAACAGAAGAATATGCCATTTTTAGGGACATTGGGGCAATCAAGAAAAGGCATATCCATCTTTTAGAGCAAGCTATAGCTAGTTACCCGTCTCTTTGGTCATGGCGTGAGAAATTCCCGCGTCCAAAAATGAGAGAATTTGGATACGCCATCTTGGGTGATATGTTGGAGTTCCTCACAGTGACTCGGTGGGGAAACCTCACTGAAACAAAGAAAGCTGAATTTGAGACTTTAGTGTGTGAGTTGGAGGCCTTTGGGTTTGATATGCAATGGTTGAAGAGCACAGAGACACTGATTAAACAAAGCAAGATAGATAAGGAAGCCATTGATCACATGAAGAGACTTGAAGTGCAAGTACAGGAACAACATACTGTTATGCAGGAATTAGAGGTTCGTTTTCAGGTGGCGAAAGAGGAGCTAACAAATTTGAAATCAGAACTAGGGAGAATAAGATGTGAGCTTGGAAACTTCGACGACTTCATAGGATTTTGA 5916 0.3927 MAMDFGVSLGAAIVKDVVYAATRQLRYSFCFSNLVEDVVREKERLLLTRNSVLDKAEKAKKRTEKISSDVEQWLNDANLILEEVEMLEVKAKEKKSTFLCHCPIWIWRHRLGKEAARKADTIRKLDKNSKFKQFSRLATLPGMKYYSSEGFIYFESTKSTYDQILNALKDDEVCVIGVYGMGGTGKTALVKEVGKEAEQIFDKVVFLAVSSAIDVRKIQGNIASSLGFELKEEDISERAKRLSMRLTTGESILIILDDVWQMLDFEAIGIPFGKDLVRFKCNVLLTTRSRQVCSMMDCQKIVPLSLIAEEEAWALFQKHADITDSASDPLKGLAQAITNECKGLPVAIKAVASTLKGKNLVEWEEALETLRDSRPLDIEPGLENPYKCLQLSYDNLKNEDAKSLFLLCSFFPEDSEIPLEILIRFGFGLGLFEQVKSFKRARTKVSAIINKLISSGLLLQAEERPSVLMHDLVRDVALWIAKEKVHVILGPKMDTEALREDTNIKDTVRFLYFYNINEFPDQLDCPNLEILYMYTEEKGSFQVPNSLFNGVNELKVLTLHFHRLLKETLLKETRCLLGAQAIYCLTNLRTLCLKGCKLDNISFLGNLEKLETLEFCNCMINELPNDTAELRKLRLLDVSLCSIGGNPYEVLGRCSQLEELYFVKNDLSEKVLNDQNLAKFFRKSSSSHRLQRYHVYIGSDNYKFKGDMRSRFLSINHFDVSISSSTIKDLIQRAEILFLRKIKRGCKNIAPDILQIEGKSTNELVELHIDSSEEMEYLIDTTALFEVGIVFSNLVKLRISWMKRLKELFCGPPPLGLFEKLEELCVAQCSQLCSILSFWKLNFQNLKILKFENCPMLTSLFSSAVTQSLGQLEVLKIRHCDGLKHIMTGEDAEIVLDDNGQQVFRSVFTKLKRLIVKWCGQLESLFPVSFSKGLVQLEYLEIDKAPELKYIFYQNQLSCQNQNELHIIEFPVLKLLKLLHLPNIINICPENYHPMWPSLQNLYLLQCPHLNIMSVNNSIFGLTTRHQGDIEEPMPLVTHSSQVVNGVSPLLTLQHVESLVVGFCKIEGILQLTGLPINGVIDQLTSCLHRLSLENLPELGYIFRGPLQVFSLPNLVELCVHGCRKLKYIFSSCIAGSLPHLEVLDIKYCDQLEEIIEDEEQRNHLNHCKESNEGEITLVSTTLEDMSLIHQSTGPFNFHSLKQLKLASCPMLRSLFTPSTAKTLTSLQYLTIEECQRLKFLVAEEAVQENSPEEIVKEDHEGESHVFFSKLEVLRVEKCDALEYIFPVSYAQGLVELKNMVVSETHQIKYIFGESHHGENSSSRKKNQIQVQLPVLTEFCLRGLPSIISICPERFYVECLSLRRFSLDSLGLPIMSMKNSMKSSKEIEGGCTSNQVSLEEVPDIQTIENSGKLSLCTCEIEAVFQIEGPSINKHQDSLTLSLSYLDLHSLPELRHIWKGPQELLNLENLMELSVFECEKLKYIFSSSVLRSLPQLMSLTIKHCELLVQIIEEDEGDRNTLDCNCQNVCFPRLEILDIQQCNNLKCLFSIFSPLELPQLQFLFIEDCSLLEKVFRGKECEIEQEQVPLFPTLECLRLRKLPNLIDICQGFKLKSVYHEVEDCPKLASAAAATLKILPQEHRYPEENREHKEEGKGNKGKQKLLIEETNAVDLTKSSIKIKEVNLGDASSSTSTPSIDAGFNPNNNTTETIFYLPKVAEDYIQGLGNNCKTKHLCEDFNCGVAVSALMAPQELYTPVPAALNGHDPSPAVILNSAPTDSSLITPSTAIQSSVSLPAVHIPLTEVDQLEITPTEEYAIFRDIGAIKKRHIHLLEQAIASYPSLWSWREKFPRPKMREFGYAILGDMLEFLTVTRWGNLTETKKAEFETLVCELEAFGFDMQWLKSTETLIKQSKIDKEAIDHMKRLEVQVQEQHTVMQELEVRFQVAKEELTNLKSELGRIRCELGNFDDFIGF* 1972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1712 1971 SUPERFAMILY RNI-like 580 957 - -
Lja6g1712 1971 PRINTS Disease resistance protein signature 628 644 - -
Lja6g1712 1971 PRINTS Disease resistance protein signature 175 190 - -
Lja6g1712 1971 PRINTS Disease resistance protein signature 246 260 - -
Lja6g1712 1971 PRINTS Disease resistance protein signature 341 355 - -
Lja6g1712 1971 Gene3D Ribonuclease Inhibitor 1373 1632 IPR032675 -
Lja6g1712 1971 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 8 888 - -
Lja6g1712 1971 MobiDBLite consensus disorder prediction 1638 1658 - -
Lja6g1712 1971 Coils Coil 1920 1961 - -
Lja6g1712 1971 Gene3D - 144 302 IPR027417 -
Lja6g1712 1971 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1197 1520 - -
Lja6g1712 1971 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 907 1177 - -
Lja6g1712 1971 Pfam NB-ARC domain 159 395 IPR002182 GO:0043531
Lja6g1712 1971 SUPERFAMILY RNI-like 976 1238 - -
Lja6g1712 1971 SUPERFAMILY RNI-like 1441 1602 - -
Lja6g1712 1971 PANTHER - 8 888 - -
Lja6g1712 1971 PANTHER - 1197 1520 - -
Lja6g1712 1971 PANTHER - 907 1177 - -
Lja6g1712 1971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 408 IPR027417 -
Lja6g1712 1971 Gene3D Ribonuclease Inhibitor 506 710 IPR032675 -
Lja6g1712 1971 Gene3D Ribonuclease Inhibitor 711 892 IPR032675 -
Lja6g1712 1971 Gene3D Ribonuclease Inhibitor 1178 1371 IPR032675 -
Lja6g1712 1971 Gene3D Ribonuclease Inhibitor 1038 1172 IPR032675 -
Lja6g1712 1971 Gene3D - 392 478 IPR036388 -
Lja6g1712 1971 Gene3D - 307 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1712 Lja-Chr6 44209386 44218357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1712 162 480 WRKY Transcription Factor Family AT5G45050 27.439 2.56e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1712 - - aprc:113854917 1476.84