LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja6g1699	ATGGAGGATAACCACCAAATCATCAATTTTGCTCCTTCTTCTTCATCTTCTGTGATGTCTCTGAAAAAATATGATGTTTTTCTTAGCTTTCGTGGTGAAGATACTCGAGACAACTTCACCAGCCATCTTTATGATGCTCTCCAAAAGGAAGTGGAGACCTACATAGACTACAGGCTTGACAAGGGAGATGAGATCTCACAAGCACTCATCAAAGCCATACAAGACTCACTTGTATCTGTTGTCATCTTCTCTGAAAACTATGCTTCCTCCAAGTGGTGCTTGGATGAGATCAGCGTGATTCTTCAATGCAAGAGAGATCATGGACAAATTGTAATACCTGTGTTCTATAAAGTAGATCCTTCACATGTCAGGAAGCAGACAGGGAGCTACAAGGAAGCTTTTGCAAAGCATGAGCAAGATCTGAACAACAGTGATGATGACAAGTTGCAGAAATGGAGATGTGCACTCAGAGATGCAGCCAATTTGGCAGGGTGGGACTCTCAGAGTTTTAGGAATGAATCTGAATTCATTAAGGACATTGTTAAAGATGTTTTACAAAAACTGAATATCAGATACCCAGTGGAATTGAAGGGATTAGTTGGAATAGAGGAAAATTATGCAGGGGTTGAATCATTATTGAAAATTGGCTCAATTGATGATGTTCGAGTGGTTGGAATATGGGGCATGGGTGGCATAGGGAAGACCACACTGGCGCGTGCTTTGTATGCCAAGTTGTCTATTCAATTTGAAGGTCATTGCTTCCTCAAAAGTGTAAGGGAACAATCAGAAAAGAAGGGTTTAGATGCTTTGCGCAACAAACTTTTTTCTGAGTTGTTAGGAGAAAAAAATCTTCAAGTTGAGTCCCCTTATGTGATGAGAAGGCTTGCACGTAAGAAAGTTCTTATTGTTTTGGATGATGTGGCTACCTCTCAACAGTTACAAGAACTCATCACTGATTATTACTGTTTGGCACCAGGAAGTAGAGTGATTGTAACGACTAGAGACAAACACATAATTAGTCAGGTGAATGGTATATATGAGGTCAAGGAACTGAATTACCATGACTCTCTTCACCTTTTCTACTTGAATGCCTTCAAAGAAAAGTGTCTTGATGGATATGAAGAGCTATCAAAATGTGTGATTGCATATTGCAAACGAAATCCTTTGGCTTTAAAAGTCTTGGGTGCACGTCTTCGATCAAAGAGTATAGATGTGTGGAAAAGTGAATTGAAAAAGCTCTGCAAGATTCCAGACGTGAATATTCATAATGTCTTGAAATTGAGTTTTGATGGCTTGGATTCTGATGAGAAGAACATATTTCTAGATATTGCATGCTTCTTAAAAGGAGAATCTAGAGATTACGTGACAAGTCTACTAGATGCTTGTGGTTTCTTTCCCGATGTTGGGATAGAAGACCTTATAGATAAGTCTCTTTTAACTGTTTCAAATGAGGGTCATATAGAAATGCATGACTTGATACAAGAAATGGGTTGGAATATTGTTCGTCAAGAATTTGATAAAGACCCTGGACGACGAAGTCGATTGTGGGATCCCGAGGAAGTGTTTGATGTATTGAAAAATAATAAGGGAACTGAATCTGTAGAAGGCATAATTTTAAATGTGTCCAAAATTAGAAAGGATTTACATTTGGGCTTTAGTTCCTTCACAAAAATGACTGAAGTAAGAATTCTTAAATTCTATTATGGTAGGTGGAGTAAAGAATGTAAGATATACCTTCCTAATGGTCTTGACTCATTGTCTGACAAATTGAGACTCCTTGAATGGCATCGATACTGTTTGGAGTCTTTGCCATCAACCTTTTGTGCTGAAAAGCTGGTTAAGCTTGTCATGTCACGCAGCAACCTTAAAAAGCTTTGGGATGAAGTTCAAAATCTTGTGAATTTAAAGGAAATTGACCTTACATGCTCCAAAGACCTGGTTGAGCTCCCAGACTTAACTCATGCTACAAATCTTGAAGTATTACGTCTTGGGAAATGTATAAGTTTGCGTGAAGTTCATCCATCCATTTTATCTCTCCCCAATCTTTGGGATCTGAATTTACGTTGTTGCACCAAGATTGAAAGCCTTGAAAGTGAGGTCCATTCAAAATCTCTTCGCACAATCAACCTCAGCAACTGCTCATCCCTAAAGAAATTCTCAGTCTTCTCTGAGAAATTGGAGGAATTGTGGTTAGATGATACAGCTATCCAGGAACTACCCTCGTCAATTTGGCGTTGTGAGAAACTTAGGGACTTGAGTCTAATGGGGTGTGACAATCTTAAGAGTTTTGGGATTGGGAGCAAGTCATCTCATGATCCAGTAAATGCATCTCTTGTGTCTCTAAACCTTTCTGGGTGCAAATTAGTGAATGAATCCAATCTAAGTTTAATCCTTGATGGTATGCGGTCTTTATCTGAGTTGTATTTGGAAGATTGTTGCAACTTACGAGCACTCCCTGACTCCATTGGCTCGTTAACATCGTTGGAGTCGTTAGACCTAAGTGGAAGCATTAATGTTGAGATGTTGTCTCTAAACATCAAGAACCTTTTGAAGCTAGAATATCTTTGGTTATACAATTGCAGGAAACTTGTGTCTCTGCCAGAGCTTCCACCTTCCCTGGTGGCGTTACCTGCCACTATCTGCCTAGAGTTACGAGCACTCCCTGACATGAAGAACCTTTTGAAGCTAGAAGATCTTTGCTTAGACAATTGCAGGAAACTTGTGTCTCTGCCAGAGCTTCCACCTTCCCTGATAAGGTTGCCGTCAACTGCACATCTCTGGAGACCAACTTCAGTACTCAATTGTTGTCGGTGGAAATACAGATGA	2826	0.3967	MEDNHQIINFAPSSSSSVMSLKKYDVFLSFRGEDTRDNFTSHLYDALQKEVETYIDYRLDKGDEISQALIKAIQDSLVSVVIFSENYASSKWCLDEISVILQCKRDHGQIVIPVFYKVDPSHVRKQTGSYKEAFAKHEQDLNNSDDDKLQKWRCALRDAANLAGWDSQSFRNESEFIKDIVKDVLQKLNIRYPVELKGLVGIEENYAGVESLLKIGSIDDVRVVGIWGMGGIGKTTLARALYAKLSIQFEGHCFLKSVREQSEKKGLDALRNKLFSELLGEKNLQVESPYVMRRLARKKVLIVLDDVATSQQLQELITDYYCLAPGSRVIVTTRDKHIISQVNGIYEVKELNYHDSLHLFYLNAFKEKCLDGYEELSKCVIAYCKRNPLALKVLGARLRSKSIDVWKSELKKLCKIPDVNIHNVLKLSFDGLDSDEKNIFLDIACFLKGESRDYVTSLLDACGFFPDVGIEDLIDKSLLTVSNEGHIEMHDLIQEMGWNIVRQEFDKDPGRRSRLWDPEEVFDVLKNNKGTESVEGIILNVSKIRKDLHLGFSSFTKMTEVRILKFYYGRWSKECKIYLPNGLDSLSDKLRLLEWHRYCLESLPSTFCAEKLVKLVMSRSNLKKLWDEVQNLVNLKEIDLTCSKDLVELPDLTHATNLEVLRLGKCISLREVHPSILSLPNLWDLNLRCCTKIESLESEVHSKSLRTINLSNCSSLKKFSVFSEKLEELWLDDTAIQELPSSIWRCEKLRDLSLMGCDNLKSFGIGSKSSHDPVNASLVSLNLSGCKLVNESNLSLILDGMRSLSELYLEDCCNLRALPDSIGSLTSLESLDLSGSINVEMLSLNIKNLLKLEYLWLYNCRKLVSLPELPPSLVALPATICLELRALPDMKNLLKLEDLCLDNCRKLVSLPELPPSLIRLPSTAHLWRPTSVLNCCRWKYR*	942

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja6g1699	941	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	188	443	IPR027417	-
	Lja6g1699	941	SUPERFAMILY	L domain-like	489	926	-	-
	Lja6g1699	941	Gene3D	Ribonuclease Inhibitor	525	723	IPR032675	-
	Lja6g1699	941	Gene3D	Ribonuclease Inhibitor	724	925	IPR032675	-
	Lja6g1699	941	SMART	till_3	23	162	IPR000157	GO:0007165
	Lja6g1699	941	Gene3D	-	350	433	IPR042197	-
	Lja6g1699	941	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	16	878	IPR044974	GO:0006952
	Lja6g1699	941	Gene3D	-	21	185	IPR035897	-
	Lja6g1699	941	Pfam	TIR domain	23	193	IPR000157	GO:0007165
	Lja6g1699	941	SMART	AAA_5	220	365	IPR003593	-
	Lja6g1699	941	ProSiteProfiles	TIR domain profile.	22	188	IPR000157	GO:0007165
	Lja6g1699	941	SUPERFAMILY	Toll/Interleukin receptor TIR domain	14	165	IPR035897	-
	Lja6g1699	941	Gene3D	-	186	348	IPR027417	-
	Lja6g1699	941	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	16	878	-	-
	Lja6g1699	941	Pfam	NB-ARC domain	219	413	IPR002182	GO:0043531
	Lja6g1699	941	PRINTS	Disease resistance protein signature	223	238	-	-
	Lja6g1699	941	PRINTS	Disease resistance protein signature	384	398	-	-
	Lja6g1699	941	PRINTS	Disease resistance protein signature	700	716	-	-
	Lja6g1699	941	PRINTS	Disease resistance protein signature	294	308	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja6g1699	Lja-Chr6	44070740	44075378	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja6g1699	9	831	WRKY Transcription Factor Family	AT4G12020	33.412	8.63e-108	365

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja6g1699	-		-	gsj:114410062	1120.53