Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1692 ATGGAACATAAACTACCACCGACAGCAACAACTGAAGGACAACCTATCCGCTGTAAAGCGGCGGTTGCAAGAAAAGCTGGTGAGCCACTGGTGATTGAGGAGATCATTGTGGCGCCACCACTGTCTCGTGAGGTTCGGATTCATATTATATGCACCTCCCTCTGCCATGTTGATCTCACTTTTTGGAAGATGCAGGACCCTCCTGGCTTTTTCCCAAGAATTCTGGGTCATGAGGCAGTTGGGGTTGTGGAAAGTGTAGGGGAGGGTGTAACTGAAGTTACAAAAGGAGATGTGGTTGTTCCAATTTTCCTACCAGATTGTGGGGAGTGTGTAGATTGCAAATCAACCAAGAGCAACCTTTGTTCTAATTTCACTTTTGAGGTGTCTCCCTGGTTGCTTAGACACGGTGCCACTAGATTCACTGACCTTAATGGAGAGATCATATACCATTTCATGTTTGTTTCAAGTCTCAGTGAATACACTGTGGTTGACATTGCCAATGTGACCAAGATTGACCCTGAAATTCCTCCTGAAAGGGCATGCCTTCTCACTTGCGGTATAGGTGCAGGGGTAGGTGCAGCATGGAGAACAGCAGATGTGGAGCCAGGGTCTACAGTGGCTATTTTTGGGCTGGGGTCTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTAGATGTCAGCCCAGATAAATTTGAAACTGGAAAGAAGTTTGGAGTCACAGACTTTGTCAATGCTGGAGAAAGTGGGAACAAACCTGTGAGCCAGGTTATAATAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCCTCATCGGTGCATGAAGCATTTGCCTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAAAGGACAAGCCAGGAGCCAGGTTGAGCCTCAGTTCTAGTGAGGTTCTTCATGATGGAAAGAGCCTCAGGGGAAACTTATTTGGAGGACTCAAACCTAAGTCTCATGTATCCATTCTCCTCAAACGTTACATGGACAAGGAACTGCAGTTGGATAAATTTGTCACTCATGAGATGGACTTTAAGGACATCAACAAAGCTTTTGATTTATTGAGTAAAGGACAGTGTCTTCGAAGTGTGATTTGGATGAACAAATGA 1170 0.4513 MEHKLPPTATTEGQPIRCKAAVARKAGEPLVIEEIIVAPPLSREVRIHIICTSLCHVDLTFWKMQDPPGFFPRILGHEAVGVVESVGEGVTEVTKGDVVVPIFLPDCGECVDCKSTKSNLCSNFTFEVSPWLLRHGATRFTDLNGEIIYHFMFVSSLSEYTVVDIANVTKIDPEIPPERACLLTCGIGAGVGAAWRTADVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDVSPDKFETGKKFGVTDFVNAGESGNKPVSQVIIEMTGGGADYCFECVGMASSVHEAFASCRKGWGKTIVLGKDKPGARLSLSSSEVLHDGKSLRGNLFGGLKPKSHVSILLKRYMDKELQLDKFVTHEMDFKDINKAFDLLSKGQCLRSVIWMNK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1692 389 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 76 90 IPR002328 GO:0008270|GO:0016491
Lja6g1692 389 PANTHER ALCOHOL DEHYDROGENASE 11 386 - -
Lja6g1692 389 Gene3D - 190 330 - -
Lja6g1692 389 SUPERFAMILY GroES-like 11 197 IPR011032 -
Lja6g1692 389 SUPERFAMILY GroES-like 339 386 IPR011032 -
Lja6g1692 389 Pfam Alcohol dehydrogenase GroES-like domain 43 136 IPR013154 -
Lja6g1692 389 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 11 386 - -
Lja6g1692 389 Pfam Zinc-binding dehydrogenase 214 334 IPR013149 -
Lja6g1692 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 350 IPR036291 -
Lja6g1692 389 Gene3D - 21 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1692 Lja-Chr6 44005514 44020595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1692 43 185 Monolignol Biosynthesis Gene Families AT4G37980 27.778 7.16e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1692 6 44005514 44020595 Lja6g1692 6 44005514 44020595 PCT