Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1691 ATGGCCACTGAAGGACAACCTATACGCTGCAAAGCGGCGGTTGCAAGAGCCGCCGGTGAACCGCTAGTAATTGAGGAGATTGTGGTGGCGCCACCAATGCCTCGTGAAGTCCGGATTCGTATTATATGCACCTCTCTCTGTCACAGCGATGTCACTTTCTGGAAGCTGCTGGACTTTTTTCCAAGAATATTGGGTCATGAGGCTGTTGGGGTTGTGGAAAGTGTAGGGAAGGATGTGACAGAAGTTACAAAAGGAGATGTGGTTATTCCAATTTACTTACCAGATTGTGGGGAGTGTACAGATTGCAAATCAACCAAGAGCAATCGCTGTACTAATTTCCCATTCAAGGTGTCTCCTTCCATGCCGAGAGATGGTACCACTAGATTCACTGACCTAAACGGAGAGATCATACATCATTTCATGTTTATTTCAAGTTTCAGTGAGTACACTGTGGTCGACGTTGCCAATGTAACCAAGATTGACCCTGAAATTCCACCTGACAGGGCATGCCTCCTCAGTTGTGGCATATCAACAGGGGTAGGTGCTGCATGGAGAACAGCAAGCGTGGAGCCAGGGTCTACAGTGGCTATTTTTGGTCTGGGATCAATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATTGGAGTTGATGTCAACCCGGGAAAATTTGAAATGGGAAAAAAGTTTGGACTCACAGACTTTGTCAATTCTAGAGAATGTGGGAACAAACCTGTGAGCCAGGTTATCATAGAAATGACTGGTGGGGGAGCAGATTATAGCTTCGAGTGTGTTGGTATGGCGTCATTGGTACATGAAGCATTCGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTGTAGGAGTGGACAAGCCAGGAGCCATGTTGACTTTCAGTTCTAGTGAGGTGCTTCATGATGGGAAAACTCTCATGGGATCCTTGTTTGGAGGACTCAAACCTAAGACTCATGTGCCCATTCTCCTTAAACGTTACATGGACAAGTGCTGCAGACAGAGAGAGAGAGAGAGACACAGCTTTTGTTGTTGTTAG 1068 0.4616 MATEGQPIRCKAAVARAAGEPLVIEEIVVAPPMPREVRIRIICTSLCHSDVTFWKLLDFFPRILGHEAVGVVESVGKDVTEVTKGDVVIPIYLPDCGECTDCKSTKSNRCTNFPFKVSPSMPRDGTTRFTDLNGEIIHHFMFISSFSEYTVVDVANVTKIDPEIPPDRACLLSCGISTGVGAAWRTASVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDVNPGKFEMGKKFGLTDFVNSRECGNKPVSQVIIEMTGGGADYSFECVGMASLVHEAFASCRKGWGKTIVVGVDKPGAMLTFSSSEVLHDGKTLMGSLFGGLKPKTHVPILLKRYMDKCCRQRERERHSFCCC* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1691 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Lja6g1691 355 Gene3D - 13 340 - -
Lja6g1691 355 Gene3D - 179 319 - -
Lja6g1691 355 SUPERFAMILY GroES-like 3 187 IPR011032 -
Lja6g1691 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 339 IPR036291 -
Lja6g1691 355 Pfam Zinc-binding dehydrogenase 203 323 IPR013149 -
Lja6g1691 355 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 4 349 - -
Lja6g1691 355 Pfam Alcohol dehydrogenase GroES-like domain 35 159 IPR013154 -
Lja6g1691 355 PANTHER ALCOHOL DEHYDROGENASE 4 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1691 Lja-Chr6 44000735 44005492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1691 35 174 Monolignol Biosynthesis Gene Families AT4G39330 27.083 6.46e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1691 K00121 - gmx:100817521 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1691 6 44000735 44005492 Lja6g1691 6 44000735 44005492 PCT