Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1673 ATGGAGGTTAAGAACAGAATATTCCTGTGCTTATTAATAATCATCACTATGAAGTGTTACATAACAGAAGGCAGAGACCCTGTGTTGCACAGGGTTGATTTTGGTTTTGACAAGCACATCTACAATGTTCTGGAGGTGAATCAAAAAGACTATGAGAATTGTATTGACACAAACTTCATAAACAACATTACAAGAGGAGGAAGAGATGTTTTCCAGCTATTAGAAACAAGAACCTATTATTTTCTCAGTGGCAGAGGCTTTTGCTTTCAAGGAATGAAGGTTGCAATAAATGTTGAACAATCACTGCCACCACCACCACCATTACCTAACAAGGCCTTTCCATCAAGTAGAATGGACCATACTAAACTATTTGTGCTTTTCTTCACAGCTTTGTTGATTTGGACCTTCATATAG 414 0.3744 MEVKNRIFLCLLIIITMKCYITEGRDPVLHRVDFGFDKHIYNVLEVNQKDYENCIDTNFINNITRGGRDVFQLLETRTYYFLSGRGFCFQGMKVAINVEQSLPPPPPLPNKAFPSSRMDHTKLFVLFFTALLIWTFI* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1673 137 PANTHER BLUE COPPER PROTEIN 34 124 IPR039391 GO:0009055
Lja6g1673 137 PANTHER BLUE COPPER PROTEIN 5 32 IPR039391 GO:0009055
Lja6g1673 137 ProSiteProfiles Phytocyanin domain profile. 1 100 IPR003245 GO:0009055
Lja6g1673 137 SUPERFAMILY Cupredoxins 32 98 IPR008972 -
Lja6g1673 137 Gene3D - 17 102 IPR008972 -
Lja6g1673 137 PANTHER EARLY NODULIN-LIKE PROTEIN 34 124 - -
Lja6g1673 137 PANTHER EARLY NODULIN-LIKE PROTEIN 5 32 - -
Lja6g1673 137 Pfam Plastocyanin-like domain 33 92 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1673 Lja-Chr6 43781433 43782024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1673 34 116 Phytocyanin Superfamily AT2G27035 55.422 1.37e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1673 - - lang:109342762 167.162