Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1672 ATGGGTTGGAGATGTAGCTGTGTGGCCTTAGTTGCTGTAGTATTGGTTCTGCCATTCCTAGCTTATTCTGGTTCTGTTATCAAGAACCTTCCTGGTTATGATGGTGATCTTCCATTCAAGCTTGAAACTGGTTCAAATCCATTTTACATCGGTGGTGGCTCATATGCAGGACTAACTACTGGTCCTCTAGTTCAAAAAGTATATGAAGGTTACATAGCTAGAAGCGCGCCACGCATCAACATCAAAGGGTATGTGATTGCAAGCCCAGCTGTTGATACGGTTCAATTAGTAAACACGAGAGTTCTATATGCATACCATATGAGTCTTATACCAAAAGAACTCTATCAGAGTTATGATCACATCCTCATTGACATTTGGGCAAATGATGAAAAAGTGTGGAAGGCCCTTCAAGTAAAGGAGGGGATTAAGGAGGAGTTCTTGAGATGCAACAAGACTTTGGCATACACTACAACTCTGAGTAACGTCGTAGAATCTTATCGGAATCTCACTAAAGCTAACCTCCAAGCTCTCGTTTACTGTTCTGATCTTGACATGTCCGTACCACAACTGGGTACTCAACATTGGATCAAGTCATTGAACATGAGCATAAGTGACAAATGGCGTGCATGGTTTGTGGAGGGTCAAGTAGCCGGATTCACAGAAGTCTACAAAATGAAAGAAGACCACTACTTTACATATGTGGCAGTGAAGGGTGCTGGACATGTGGCCCAGACATTTAAGCCCAAGGAAGTTTATCATGTGATTAAAAGTTGGTTTTCGTTTTCTCTTATATAA 795 0.4164 MGWRCSCVALVAVVLVLPFLAYSGSVIKNLPGYDGDLPFKLETGSNPFYIGGGSYAGLTTGPLVQKVYEGYIARSAPRINIKGYVIASPAVDTVQLVNTRVLYAYHMSLIPKELYQSYDHILIDIWANDEKVWKALQVKEGIKEEFLRCNKTLAYTTTLSNVVESYRNLTKANLQALVYCSDLDMSVPQLGTQHWIKSLNMSISDKWRAWFVEGQVAGFTEVYKMKEDHYFTYVAVKGAGHVAQTFKPKEVYHVIKSWFSFSLI* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1672 264 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 118 261 IPR001563 GO:0004185|GO:0006508
Lja6g1672 264 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 118 261 - -
Lja6g1672 264 Gene3D - 119 262 - -
Lja6g1672 264 Gene3D alpha/beta hydrolase 40 118 IPR029058 -
Lja6g1672 264 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 119 IPR001563 GO:0004185|GO:0006508
Lja6g1672 264 SUPERFAMILY alpha/beta-Hydrolases 44 260 IPR029058 -
Lja6g1672 264 Pfam Serine carboxypeptidase 118 259 IPR001563 GO:0004185|GO:0006508
Lja6g1672 264 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 45 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1672 Lja-Chr6 43759720 43767828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1672 110 260 Calmodulin-binding Proteins AT2G22960 37.748 6.38e-31 112