Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1651 ATGAAGAAGATCTTTTCATCGGAGACCATGGACATCCCCGACGGCGTGAGCATCAAGGTTGAAGGCCCTCGTGGGGATTTCCAGCTCATCACCGATGAGAACGGCAAGAAGAAGCTCAAGATCGAGGCCTGGTTCGGTACCCACAAGATGAGGCTCATCTATGCCCATTTTCCCATCAATGCTAGCATCACTAATCACAACAAGGGCATCAAGATCCATAGCTTTCTACTTTTCGTGAGGAAAGTGGATATGCTTGATGGAGTTTCCATTGTGCAATCTGAGAAGGTGAAGGATGAGTTGGTTTTCGATGGAAATGACATTGAGCTTGTTTCTAGGTCATGTGCCCTTATCAATCAGAACAAGGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGTGAGAAGGGGACCGCATTAATAAAGAAGGTACTTTTTTATCACCTTTTAAGTTCATTGATGATTTCTGTAAAGATTGTAATATATGATAGATAG 492 0.4228 MKKIFSSETMDIPDGVSIKVEGPRGDFQLITDENGKKKLKIEAWFGTHKMRLIYAHFPINASITNHNKGIKIHSFLLFVRKVDMLDGVSIVQSEKVKDELVFDGNDIELVSRSCALINQNKDIRKFLDGIYVSEKGTALIKKVLFYHLLSSLMISVKIVIYDR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1651 163 PANTHER RIBOSOMAL PROTEIN L6-RELATED 48 136 - -
Lja6g1651 163 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 48 136 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lja6g1651 163 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 49 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lja6g1651 163 Gene3D - 45 141 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lja6g1651 163 PANTHER RIBOSOMAL PROTEIN L6-RELATED 1 49 - -
Lja6g1651 163 SUPERFAMILY Ribosomal protein L6 48 135 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1651 Lja-Chr6 43395233 43396145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1651 1 135 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 57.754 8.17e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1651 K02940 - gmx:100306058 195.667