Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1642 ATGGCTAGTACACTCGATCTAATGTTTCTTCTCAGGGAAATTTTTGTTTCCTTTTTTATCTTCTTAGTGACCCGTTTCTCCTTCCGTTCACTCTTCAAAAGCCACCACCAGAAACTTCCACCGGGGCCGAGAGGCTGGCCAGTTCTGGGTGCACTTCCTCTCATGGGAAGCATGCCTCATGTCACACTCTCAAACATGGCTAAAAAATATGGACCTGTCATGTACCTCAAAATGGGCACCAACAGCTTGGTGGTGGCTTCTACCCCTGCTGCGGCGCGTGCATTTCTCAAAACCCTTGACCTGAACTTCTCCAACAGGCCCCCAAATGCAGGTGCAACTCATTTAGCTTATGACTCACAAGACATGGTGTTTGCTGAGTACGGGTCAAGGTGGAAGCTCCTAAGGAAGCTCAGCAACCTGCACATGCTGGGAGGAAAGGCTCTTGACGACTGGGCACAGTTTCGCGACCAAGAAATGGGGTACATGCTTCGCGCCATGTATGATTGCAGCAAGAAGGGGGAGGCAGTGGTGGTGCCGGAGATGCTGACATATGCTATGGCTAACATGATAGGTCAAGTGATCCTGAGCCGCCGCGTGTTTGAGACCAAAGGTTCTGAGTCCAATGAGTTCAAGGACATGGTTGTGGAGCTCATGACTGTTGCTGGGTACTTCAACATTGGTGATTTTATTCCTGCGCTTGGGTGGTTTGATCTTCAAGGGATAGAGGGAGGGATGAAGGCCTTGCATAAGAAGTTTGACTCTTTGTTGACGAGGATGATTGAGGAGCACTTGGCTTCTAGTCATAAGAGGAAGCTTAAGCCTGATTTCTTGGATGTTGTCATGGCTTATCAGAGTGAAAACTCTGGTGGGGAGAAACTATCACTCACCAACATCAAGGCTCTACTTCTGAATCTATTCACAGCAGGCACCGACACTTCTTCAAGCATCATAGAGTGGTCACTAGCAGAGATGTTGAATAACCCAAAAATCATGAGGAAAGCTCACGAGGAAATGGACAGAGTCATCGGCAAGGACCGCCGCCTCCGAGAATCGGACCTTCCAAATCTCCCCTACTTCCAAGCCATCTGCAAAGAGACATACAGAAAGCACCCCTCAACCCCACTGAACCTGCCTCGAATCTCCACGGAACCGTGCGAGGTGAACGGCTACTACATCCCCAAGAACACAAGGCTGAATGTGAACATATGGGCCATAGGAAGGGACCCTGACGTGTGGGAGAATCCTCTGGAGTATAATCCTGAGAGGTTTCTGAGCGGGAGGAACGCGAAGATTGATCCGCGTGGGAATGATTTCGAGCTGATTCCGTTCGGTGCTGGGAGGAGGATTTGTGCTGGGACGAGGATGGGGATTGTGCTTGTTCAGTACATTTTGGGGACTTTGGTGCATTCTTATGATTGGAAGTTGCCGCCTGGTGTTAAGGAGTTGGACATGGAAGAGGCATTTGGACTTGCCTTGCAGAAGAAGGTGCCTCTCTCTGTTATGGTTACTCCAAGGTTGCCACCAAGTGCTTACATTCCTTGA 1542 0.4955 MASTLDLMFLLREIFVSFFIFLVTRFSFRSLFKSHHQKLPPGPRGWPVLGALPLMGSMPHVTLSNMAKKYGPVMYLKMGTNSLVVASTPAAARAFLKTLDLNFSNRPPNAGATHLAYDSQDMVFAEYGSRWKLLRKLSNLHMLGGKALDDWAQFRDQEMGYMLRAMYDCSKKGEAVVVPEMLTYAMANMIGQVILSRRVFETKGSESNEFKDMVVELMTVAGYFNIGDFIPALGWFDLQGIEGGMKALHKKFDSLLTRMIEEHLASSHKRKLKPDFLDVVMAYQSENSGGEKLSLTNIKALLLNLFTAGTDTSSSIIEWSLAEMLNNPKIMRKAHEEMDRVIGKDRRLRESDLPNLPYFQAICKETYRKHPSTPLNLPRISTEPCEVNGYYIPKNTRLNVNIWAIGRDPDVWENPLEYNPERFLSGRNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSYDWKLPPGVKELDMEEAFGLALQKKVPLSVMVTPRLPPSAYIP* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1642 513 PANTHER CYTOCHROME P450 71B11-RELATED 10 504 - -
Lja6g1642 513 PANTHER FLAVONOID 3'-MONOOXYGENASE 10 504 - -
Lja6g1642 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Lja6g1642 513 SUPERFAMILY Cytochrome P450 38 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 Gene3D Cytochrome P450 31 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 Pfam Cytochrome P450 40 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1642 513 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1642 Lja-Chr6 43284786 43288546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1642 10 511 Cytochrome P450 AT5G07990 47.441 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1642 K13083 - gmx:547705 883.248