Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1638 ATGGACCCCAACCAAACGTTATTCTCTGTGGTCACGTTAATGCCCCAAGAAGATCCCAGCCTGGATCGAATCCAAGTCTACAACGTGTGTATACAACAGCCACTGAAATTAATTTCAGATGGCTTGTGGGCTCATGAAAATTTGATTCCATCCAAATCTTCATACACAATGCTTGAGATGCAAATCTTGGTCATTTTCTTCATCACCCAAAGCTTCCATTTCCTCCTCAAGCGTTTAGGGTTCCCTTATTTGGCCTCCCAAGTATTGGCATATAAGAAGATGTTGTTCCCGTTCGGAAGCCCGGACATCCTGAACACCATCTCCTCCTTCGGCTACACCTTCTACCTCTTCCTCAACTCTGTTCAGATGGATTTCAACTTAATCACCAAGACGGGTAAAAAAGCTTGGGTCATCGCCCTCCTCAACATGTTCACCCCCATCATTCTCGCCGGCGGCGTCTTCGTCCAATCTTTCAACCCCTTATGGACCTCCACACTCGGCCAGAAGGAAGCTGATGACCTCTCCGTCATCACCATCTCCCAGAGCGGCTGCTCCTTTGCCGTCATCGCCTGCATGCTCAATGAGCTCGGCGTCATCAACTCCGAGCTCGGTCGCCTCGCGCTCTCCACCGCCTTCATCAATGACCTCACAGGTGGGATGATGGCCGGCCTCGGCACCGCCTTCGTGACCTCCGTCTCGCAGGGCTACCTCATGGTGGCCCGCAACCTCTTCCTCTTCTTCGTGTACCTCACTATGATCCCTCTAGTCGGCCACCCTGTGATGAAGTGGATGGTGAGGAGCACGCCAGAGGGGCGGCCGGTGAGGAGGATATACATCGTAGCCATCGTGTTCGTGTTGTTCATACTCAGCCACATTGCGAAGTATTTCAACCAACCGTTCATGTCAGGGGCGGTGATCCTAGGGCTGACAGTCCCTCCAGGACCGCCGCTCGGGTCCGAGCTGGTCGACCGGATGGAGTTAATCTCGACGTGGTTCCTATCACCTCTCTTCGTGACGTGCTGCGCCATGAAGATAGACCTCACCATATGTGGGCCTCCCAAGTTCGTGTTGGCGGTTGCGTTCATCATCGCGATCACCCACGTGATCAGGCAAGCGCAGATCGTTGCAATCTGCCAATATTGCAAGATCCCCGCACGCGATGGTTTCTGCCTCGCTCTCATCTTGAGCTGCAAGGGCATCGTGGATATCTGCTCCTACATCCTTCTCTTCGACGGAACGCAACAATCTCCAACAGTAGTAGCAGTGATGGTGATCTCAGTGTTAGTCTTGGGAACAACCTCGCGGGTGGGTGTGAAGTCACTATATGACCCTTCAAGAAAATATGCAGGATACCAGAAAAGAAACATCATGAATCTCAAGAAAAACTCAGAGCTTCGTGTCGTAGCATGCGTCCACAAGCCAAGCCACATGATCCACATCAAGAATTTCCTCCAAGTTTGTTCTCCTACACTAGACAATCCTCTAGTGGTGGACGTTTTGCATCTCATGGAGCTCATCGGAAGAAGCTCACCCATTTTCATCGCGCATCGCCTCCAGCAAAAAACACAGTCCACACCCAACTACTCCGGCGAACTCATCGTGATCTTTGACCTCTTCGAGCGTGACCATGCCGGTTCTGCCACGGCCAACACCTACACTGCCATATCCCCAGTGTCCCTCTTGCATGAGGATGTATGTAATCTTGCACTGGACAAGATGGCGTCCATCATAATCCTCCCATTTCATGTGAGGTGGACGGAGAAGGGTTTAATCGAGTCAGAGGACAACAAAATAAGGTCATTGAACCACAAAGTTTTAGAAAGGGCACCGTGTTCGATCGGGATCCTTGTGAACCACAGTTCTTCGAGCCAAAACTCGGTGAGTTATAAAGTGGCAATGGTTTTTCTTGGTGGGCCGGATGATAGAGAAGCCTTGGCTTTGGCAAAGAGGTTTGCTAGCAATTTAGATAACAAGTTGTTCGTGTATCGCTTCGTTTCACACGAGCATGATTCCACAAACTGGGAAAACATGATTGACAACGAGGAATTGAGGGAGGTGCGTGGAGCTTTTGGCAAGGTTGAAAATGTTACATATGAAGAAAAATCAATAGATGATGCTTCACAAACGACAGAGTTATTGAGAGATGTGGCAAATAGTAAGTTTGATTTTATTATAGTTGGGAGAAGGAATGGGGTGAAATCTGAAATGACAGCCGGGTTGGAAAACTGGACAGAATATACAGAATTGGGGGTGATAGGGGATTTGCTTGCTTCTCCGGATATGGAGACTAAAGCTTCTATTTTAGTTGTGCAGCAACAACAAACCAAGGTTTTGACGGCATCATGA 2346 0.494 MDPNQTLFSVVTLMPQEDPSLDRIQVYNVCIQQPLKLISDGLWAHENLIPSKSSYTMLEMQILVIFFITQSFHFLLKRLGFPYLASQVLAYKKMLFPFGSPDILNTISSFGYTFYLFLNSVQMDFNLITKTGKKAWVIALLNMFTPIILAGGVFVQSFNPLWTSTLGQKEADDLSVITISQSGCSFAVIACMLNELGVINSELGRLALSTAFINDLTGGMMAGLGTAFVTSVSQGYLMVARNLFLFFVYLTMIPLVGHPVMKWMVRSTPEGRPVRRIYIVAIVFVLFILSHIAKYFNQPFMSGAVILGLTVPPGPPLGSELVDRMELISTWFLSPLFVTCCAMKIDLTICGPPKFVLAVAFIIAITHVIRQAQIVAICQYCKIPARDGFCLALILSCKGIVDICSYILLFDGTQQSPTVVAVMVISVLVLGTTSRVGVKSLYDPSRKYAGYQKRNIMNLKKNSELRVVACVHKPSHMIHIKNFLQVCSPTLDNPLVVDVLHLMELIGRSSPIFIAHRLQQKTQSTPNYSGELIVIFDLFERDHAGSATANTYTAISPVSLLHEDVCNLALDKMASIIILPFHVRWTEKGLIESEDNKIRSLNHKVLERAPCSIGILVNHSSSSQNSVSYKVAMVFLGGPDDREALALAKRFASNLDNKLFVYRFVSHEHDSTNWENMIDNEELREVRGAFGKVENVTYEEKSIDDASQTTELLRDVANSKFDFIIVGRRNGVKSEMTAGLENWTEYTELGVIGDLLASPDMETKASILVVQQQQTKVLTAS* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1638 781 Pfam Sodium/hydrogen exchanger family 71 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g1638 781 Gene3D - 56 448 IPR038770 -
Lja6g1638 781 PANTHER CATION/H+ EXCHANGER 2 15 776 - -
Lja6g1638 781 PANTHER CATION/H + ANTIPORTER 15 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1638 Lja-Chr6 43213970 43216576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1638 29 770 Antiporter Super Family AT3G44900 34.201 1.24e-146 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1638 - - gmx:100797272 977.622