Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1620 ATGCCTTATGTCACACTCACAAACATGCCTAAGAAATTTGGGCCCATCATGTTCCTCAAAATGGGCACTTGTGACACAGTTGTTGTCTCAAGCCCAAATTTTGCCCAAGCATTCCTCAAGAATTTAGACCATAATTTTTCAAACAGACCCACCATTGCAGGTGCAACCCATTTGGGCTACAATTCACAAGACCTTGTTTTTGCAAAATATGGGCCCAAGTGGAAGCTCCTTTGGAAACTAACCAACCAACACATGCTTGGAGGGAAGGCCCTTCAGGCTTGGGCCCATGTAAGAGCAAAAGAGGTTGGTGACTTGTTAAGTTGTGCAATAACAAACATGGTGAGCCAAGTGGTGCTGAGTCATAGAATATTTGAAAACAATGGGGAAGAATCTAAGGAGTTTAAGGACATGGTGGTGGAGTTCATGACAATTTCCGGGGTGAACAACGTTGGTGATTTTGTCCCTTGCATTGGCTGGATGGACTTGCAGGGTGTGGTGGGTAGGATGAAAAGGTTACATAAGAGGTTTGATGTGTTTTTGAGTAAAGTGATTGAGGATCATGTGAAGTCTGGACATGAACGTAAGGGGAAGCCAGATTTTTTAGATGTTGTGATGGCTAATGATGAAGAATGTCCCTCTAAGGAAAGACTCAGTTTGTCCAACATTAAGGCTCTACTATTGAATCTGTTCACTGCTGGCACAGACACATCATCTAGCATCATAGAATGGGCACTAGCTGAAATGTTGAAGAACCAAAACATCCTTATAAGGGCACAGAAAGAGATGGATCAAGTGGTTGGCAGAGAAAGATTGCTTCTTGAATCAGACCTTCCAAAATTGCCATACCTTCAAGCAATCTGCAAAGAAACCTATCTTTCAACTGAAGCATGTCAAGTCAATGGCTACTACATTCCCAAGAATACAAGGCTAAATGTGAATATTTGGGCCATAGGGAGAGACCCTAATGTGTGGGACAACCCATTAGAGTTCTATCCTGAAAGATTTTTAAGTGGGGATGCAGAAATGATTGATCCTAGTGGTGTTGATTTTGAGTTGATTCCCTTTCGAGCTGGAAGGAGGATTTGTGTAGGGTATAGAATGGCTATTGTGGTGATTGAGTACATTTTGGGCACTTTGGTGCACTCTTTTGATTGGAAGCTACGAAATGGGGTGGAGCTGAACATGGATGAGGCCTTTGGACTTACTTTGCAAAAGGCAGTGCCTTTGTCATCTATGGTTAGCCCTCGGTTGGTCAGCAGATGCTTATGTTTGATTAATAGCATGCTTGAATTAGCTTCTATTTTATAA 1308 0.4235 MPYVTLTNMPKKFGPIMFLKMGTCDTVVVSSPNFAQAFLKNLDHNFSNRPTIAGATHLGYNSQDLVFAKYGPKWKLLWKLTNQHMLGGKALQAWAHVRAKEVGDLLSCAITNMVSQVVLSHRIFENNGEESKEFKDMVVEFMTISGVNNVGDFVPCIGWMDLQGVVGRMKRLHKRFDVFLSKVIEDHVKSGHERKGKPDFLDVVMANDEECPSKERLSLSNIKALLLNLFTAGTDTSSSIIEWALAEMLKNQNILIRAQKEMDQVVGRERLLLESDLPKLPYLQAICKETYLSTEACQVNGYYIPKNTRLNVNIWAIGRDPNVWDNPLEFYPERFLSGDAEMIDPSGVDFELIPFRAGRRICVGYRMAIVVIEYILGTLVHSFDWKLRNGVELNMDEAFGLTLQKAVPLSSMVSPRLVSRCLCLINSMLELASIL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1620 435 PRINTS E-class P450 group I signature 362 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS E-class P450 group I signature 241 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS E-class P450 group I signature 313 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS E-class P450 group I signature 109 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS E-class P450 group I signature 10 29 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS E-class P450 group I signature 221 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS E-class P450 group I signature 352 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS P450 superfamily signature 353 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PRINTS P450 superfamily signature 232 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 Pfam Cytochrome P450 2 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 SUPERFAMILY Cytochrome P450 2 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 Gene3D Cytochrome P450 1 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1620 435 PANTHER FLAVONOID 3'-MONOOXYGENASE 1 415 - -
Lja6g1620 435 PANTHER CYTOCHROME P450 71B11-RELATED 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1620 Lja-Chr6 43063223 43065044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1620 2 424 Cytochrome P450 AT5G07990 44.444 2.23e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1620 K13083 - qsu:112039568 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1620 6 43063223 43065044 Lja6g1620 6 43063223 43065044 ECH